Sciurus carolinensis (gray squirrel): 124976242
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Entry
124976242 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: protein kintoun-like
KO
K19751
dynein axonemal assembly factor 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124976242
04812 Cytoskeleton proteins [BR:
ncar04812
]
124976242
Cilium and associated proteins [BR:
ncar03037
]
Motile cilia and associated proteins
Dynein assembly factors
124976242
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
124976242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIH1
PIH1_CS
SHQ1-like_CS
Motif
Other DBs
NCBI-GeneID:
124976242
NCBI-ProteinID:
XP_047395148
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All DBs
Position
2:complement(150528288..150537617)
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AA seq
836 aa
AA seq
DB search
MAKAAASSPLEDLDLSGEEVQRLTSAFQDPEFRRMFSAYAEELNDPENLRRYEEEITALE
RERGVEVRFVHPEPGHVLRTSLDGARRCFVNVCSNALVGAPSSRPVQGGGGCGAAAGSHW
SLPYSLAPGREYAGRSSTRYTVYDVVFHPEALALARRNRRFCQMLDATALEAVEKQFGVK
LDRRNAKTLRXKYKGTPEAAVLRTPLPGSVPAPPDGNEDPLSVFPYPYRYPAAAQNSVGP
GPQAPKPPEAVQKPAPTEPRCSVVQRHHVDLQDYRCSRDSAPSPVPHELVVTIELPLLRS
AEQAALEVTGKLLCLDSRNPDYRLRLSLPYPVDDSRGKAQFNKARRQLVITLPVALPAKL
PGPPAAPEESVGQSGTDGAACASASVGEEGPVGDPSPDPSGVGTAEAGIATPFAPEVASP
PTRAGEEIDLQPEERDLGRHSVSPPGLEEEERPPGAESSPGGXGGCSPRTSSRGLDLESP
VGRGSACGDISVETREDLEGPSTEPSDPAMGGPGTESREPLCPPLQCNQDEESLALLIQV
PQIQPQSLQWDLNPLRYKLCFSTQDLVYSFFLQFAPENKLSTXEPVISVSSNNAVIVLAK
SPESHGCWREWYCGLNKDSLEERLFVSEENVSEFLEEVLCSPFTQKMPLSPPLIEVLQVT
DEKIQIHAELQECSNPDQLQGKEKINEECHLTEKENLDHFTTSTTDSDLSVAVNALEIDT
CGSVEGFQQESLDVSQVLSGKSQQTEAKMEPAVMKEKGSTYSNEDKDNLKEPVITKEKEL
DGDHISSLPNKTIVHNIPDFESIKETNMQDGSVQIITDHVTHCAFTFQNSLLYDLD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcggcagcctcttcaccgctggaggacttggacctgagcggagaagaggtc
cagcggctcacctcagccttccaggacccggagttccggcgaatgttctccgcttacgcc
gaggagctcaatgaccccgagaacctgcggcgctacgaggaagagatcaccgcgctggag
cgtgagcgcggagtggaggtgcggttcgtgcacccggagccaggccacgtgctgcgtacc
agcttggacggggctcggcgctgcttcgtgaacgtgtgcagcaacgcgctggtgggcgcg
cccagcagccggccagtccaggggggcggcggctgcggcgcggcggccggtagccactgg
tccctgccgtacagcttggcgcctggccgtgagtacgcgggccgcagcagcactcgctac
accgtctacgacgtggtgttccacccagaagcgcttgcgctcgcccggcgaaacaggcgc
ttctgtcagatgctggacgccacggctctggaggcagtcgagaagcagttcggcgtcaag
ctggaccgccggaacgccaagaccctgaganccaaatataaggggaccccagaggctgcc
gtgctgcgcacgccccttccggggagcgtccccgccccacccgacgggaacgaagaccct
ctctcagtttttccctatccctaccggtaccccgcggccgcccagaactccgtcggcccg
gggccccaggcccccaaacctcccgaggcggttcagaagcccgcccccaccgagccccgc
tgcagtgtggtgcagcgccaccacgtggacctccaggattaccggtgctcccgggattcg
gccccgagcccggtgccgcacgagctggttgtcaccatcgagctgccgctgctgcgctcg
gctgaacaggcggcgctggaggtgacgggaaagctgctgtgccttgactcgaggaacccc
gactaccggctgcggttatccctcccctacccggtggacgacagccgcggcaaggcgcag
ttcaacaaggcgcggcggcagctggtgatcacgctgccggtggcgttaccagccaagctc
ccgggccctcccgcggcgccggaagagtcggtgggccagtccggaactgacggcgcggcc
tgcgcttccgctagcgtaggggaagaggggcctgtgggggaccccagcccggatcccagc
ggggtagggactgcagaagccgggatcgccaccccattcgcccccgaagtggcgtctccg
ccaacgcgggctggggaggagatagacctccagccggaagagcgggacttgggcaggcac
tcggtgtccccaccgggcctcgaggaggaggagcggcccccaggagctgagagctcacct
ggggggtagggtggatgctctcctagaacttcatcccgaggccttgacctggagtctcct
gtaggaagagggagtgcgtgcggagatatcagtgtagagacacgcgaggacctggagggg
ccgagcaccgagccttctgatccagcaatgggtggccctggcaccgagagcagggaacct
ttgtgtcctcctttgcagtgtaatcaggatgaagaatccttggctctgctaattcaagtg
cctcagattcagccgcaaagtcttcaatgggatctgaaccccctccggtacaaattgtgt
ttctccacacaagacttagtttattccttcttcttgcagtttgctccagaaaataaatta
agtacanaagaacccgtgattagcgtttcttcaaacaatgcagtgatagtactggccaaa
tctccagagagccatggatgttggcgagagtggtactgtggtttgaacaaagattctttg
gaggaaaggttgtttgtcagtgaagaaaatgttagtgagtttcttgaagaggtcctgtgc
tctccattcacacagaaaatgcccttgtccccaccattaattgaagttcttcaggttact
gatgagaagattcaaattcatgcagagttacaagaatgtagtaatcctgatcagcttcaa
ggaaaggaaaaaatcaatgaagaatgtcatctaactgaaaaagaaaatttagaccatttt
accacctctacaactgattctgatttatctgtagcagttaatgcactagaaatagatact
tgtggttcagttgaaggatttcaacaagagtctcttgatgtttctcaagtgctatctgga
aaatcacagcaaactgaagcaaaaatggaacctgctgttatgaaagaaaaaggttctact
tactcaaatgaggacaaagataatttaaaagaaccagtaataaccaaagaaaaagaattg
gatggagatcacatatcttcattaccgaacaaaactatagttcacaatatacctgatttt
gaaagcataaaagaaaccaatatgcaggatggcagtgtgcagattattacagatcatgtg
actcactgtgcattcacttttcagaattctttgctatatgatttagattaa
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