KEGG   Sciurus carolinensis (gray squirrel): 124976424
Entry
124976424         CDS       T08117                                 
Name
(RefSeq) sharpin-like isoform X1
  KO
K20894  shank-associated RH domain-interacting protein
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04217  Necroptosis
ncar04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    124976424
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    124976424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncar04121]
    124976424
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   LUBAC complex
    124976424
SSDB
Motif
Pfam: Sharpin_PH Zn_ribbon_RanBP ubiquitin
Other DBs
NCBI-GeneID: 124976424
NCBI-ProteinID: XP_047395263
LinkDB
Position
1:1085994..1090254
AA seq 382 aa
MAPPAGGAAAADPGSAVVLLAVHAAVRPLGAGPDAEAQLQMLQLSADPERPGRFRLELRG
AGPGAVSLEWPLESISYTIRGPSQHELQPPPGGPGTLSLRFLNTQEAQQWAALVRGATAE
GQNGSGSPLLALGPETCPVSSPSPPMAPTLKVPQPEVDFQSPGDLMEKEELAGLLAQAIA
GGDKKGAAQIAAILAQRHVALNVQLQEACFPPGPIRLQVTVEDATSAASSASSAHISLQV
YTHCTISALQEQVFSEFGFPPAVQRWVIGRCLCVPERSLASYGVQQDGDPAFLYLLSTPQ
EAPGCSPQCLQKMERELGQFFSQSLGLSRALQPASSSLPGPLQPGWPCPSCTFINAPNRP
GCEMCSTQRPCAWDSLPTASAQ
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggcgccgccggcgggcggggcggcggccgcagacccgggctcagccgtagtgctcctg
gctgtgcacgccgcggtgagaccactgggcgccgggccggacgccgaggcgcagctgcag
atgctgcagctgagcgcggaccccgaaagacccgggcgtttccggctggagctgcgaggc
gcggggcccggagcggtcagtctggagtggcccttggagtcgatctcctataccatccgc
ggccccagccaacatgaactgcagcctccaccaggagggcccggaaccctcagtctgcgc
tttctcaacactcaggaagctcagcagtgggcagccctggtgcgaggtgccactgcggag
ggacagaatggcagtggcagcccactcctagccctgggaccagaaacatgtcctgtttcc
tcacccagtccccctatggccccaacactcaaagtgccccaacctgaggtggattttcag
agccctggagacttgatggagaaagaagagctggctgggctcctggcccaggccattgca
ggtggggacaagaagggggcagctcaaatagcagcaatcctggcccagcgtcacgtggcc
ctcaatgtccagcttcaggaggcctgcttcccgcctggtcccatcaggctgcaggtcaca
gtagaagatgccacatccgctgcatcctcagcatcctctgcccacatctcactgcaggtc
tacacccactgcaccatctcagccctccaggaacaggtgttctcagagttcggtttccca
ccagctgtgcagcgctgggtcattgggaggtgcctatgtgtgcctgagcgcagccttgct
tcctatggggtccagcaggatggggaccctgctttcctctatctgctctccactccccaa
gaagccccaggatgcagccctcaatgcttgcagaagatggaaagggaactaggacagttc
ttttctcagtcattggggctgtcccgtgccctgcagccagccagttccagcctccctggc
ccacttcagcctggctggccctgtccttcctgtaccttcatcaatgccccaaatcgccct
ggctgtgagatgtgtagcacccagaggccgtgtgcttgggactcccttcctacagcatct
gcccagtag

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