Sciurus carolinensis (gray squirrel): 124976424
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Entry
124976424 CDS
T08117
Name
(RefSeq) sharpin-like isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04217
Necroptosis
ncar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124976424
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124976424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124976424
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
124976424
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GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124976424
NCBI-ProteinID:
XP_047395263
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Position
1:1085994..1090254
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AA seq
382 aa
AA seq
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MAPPAGGAAAADPGSAVVLLAVHAAVRPLGAGPDAEAQLQMLQLSADPERPGRFRLELRG
AGPGAVSLEWPLESISYTIRGPSQHELQPPPGGPGTLSLRFLNTQEAQQWAALVRGATAE
GQNGSGSPLLALGPETCPVSSPSPPMAPTLKVPQPEVDFQSPGDLMEKEELAGLLAQAIA
GGDKKGAAQIAAILAQRHVALNVQLQEACFPPGPIRLQVTVEDATSAASSASSAHISLQV
YTHCTISALQEQVFSEFGFPPAVQRWVIGRCLCVPERSLASYGVQQDGDPAFLYLLSTPQ
EAPGCSPQCLQKMERELGQFFSQSLGLSRALQPASSSLPGPLQPGWPCPSCTFINAPNRP
GCEMCSTQRPCAWDSLPTASAQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccggcgggcggggcggcggccgcagacccgggctcagccgtagtgctcctg
gctgtgcacgccgcggtgagaccactgggcgccgggccggacgccgaggcgcagctgcag
atgctgcagctgagcgcggaccccgaaagacccgggcgtttccggctggagctgcgaggc
gcggggcccggagcggtcagtctggagtggcccttggagtcgatctcctataccatccgc
ggccccagccaacatgaactgcagcctccaccaggagggcccggaaccctcagtctgcgc
tttctcaacactcaggaagctcagcagtgggcagccctggtgcgaggtgccactgcggag
ggacagaatggcagtggcagcccactcctagccctgggaccagaaacatgtcctgtttcc
tcacccagtccccctatggccccaacactcaaagtgccccaacctgaggtggattttcag
agccctggagacttgatggagaaagaagagctggctgggctcctggcccaggccattgca
ggtggggacaagaagggggcagctcaaatagcagcaatcctggcccagcgtcacgtggcc
ctcaatgtccagcttcaggaggcctgcttcccgcctggtcccatcaggctgcaggtcaca
gtagaagatgccacatccgctgcatcctcagcatcctctgcccacatctcactgcaggtc
tacacccactgcaccatctcagccctccaggaacaggtgttctcagagttcggtttccca
ccagctgtgcagcgctgggtcattgggaggtgcctatgtgtgcctgagcgcagccttgct
tcctatggggtccagcaggatggggaccctgctttcctctatctgctctccactccccaa
gaagccccaggatgcagccctcaatgcttgcagaagatggaaagggaactaggacagttc
ttttctcagtcattggggctgtcccgtgccctgcagccagccagttccagcctccctggc
ccacttcagcctggctggccctgtccttcctgtaccttcatcaatgccccaaatcgccct
ggctgtgagatgtgtagcacccagaggccgtgtgcttgggactcccttcctacagcatct
gcccagtag
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