KEGG   Sciurus carolinensis (gray squirrel): 124976672
Entry
124976672         CDS       T08117                                 
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
  KO
K03174  TNF receptor-associated factor 3
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04064  NF-kappa B signaling pathway
ncar04620  Toll-like receptor signaling pathway
ncar04621  NOD-like receptor signaling pathway
ncar04622  RIG-I-like receptor signaling pathway
ncar04657  IL-17 signaling pathway
ncar04668  TNF signaling pathway
ncar04936  Alcoholic liver disease
ncar05160  Hepatitis C
ncar05161  Hepatitis B
ncar05162  Measles
ncar05164  Influenza A
ncar05165  Human papillomavirus infection
ncar05167  Kaposi sarcoma-associated herpesvirus infection
ncar05168  Herpes simplex virus 1 infection
ncar05169  Epstein-Barr virus infection
ncar05171  Coronavirus disease - COVID-19
ncar05200  Pathways in cancer
ncar05203  Viral carcinogenesis
ncar05222  Small cell lung cancer
ncar05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    124976672
   04668 TNF signaling pathway
    124976672
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124976672
   04621 NOD-like receptor signaling pathway
    124976672
   04622 RIG-I-like receptor signaling pathway
    124976672
   04657 IL-17 signaling pathway
    124976672
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124976672
   05203 Viral carcinogenesis
    124976672
  09162 Cancer: specific types
   05222 Small cell lung cancer
    124976672
  09172 Infectious disease: viral
   05161 Hepatitis B
    124976672
   05160 Hepatitis C
    124976672
   05171 Coronavirus disease - COVID-19
    124976672
   05164 Influenza A
    124976672
   05162 Measles
    124976672
   05168 Herpes simplex virus 1 infection
    124976672
   05167 Kaposi sarcoma-associated herpesvirus infection
    124976672
   05169 Epstein-Barr virus infection
    124976672
   05165 Human papillomavirus infection
    124976672
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124976672
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    124976672
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF3_RING zf-TRAF zf-C3HC4 zf-C3HC4_2 MPS2 zf-RING_UBOX ATG16 zf-RING_4 zf-RING_5 Tropomyosin Spc29 Crescentin KxDL FliJ GAS DUF3450 LMBR1 DUF1664 T3SSipB SPATA24 V_ATPase_I THOC7 BLOC1_2 ADIP Sina_ZnF
Other DBs
NCBI-GeneID: 124976672
NCBI-ProteinID: XP_047395409
EnsemblRapid: ENSSCRG00010005588
LinkDB
Position
2:197494928..197596724
AA seq 567 aa
MESSKKMDSMGALQTNPPLKLQPDRSGSSVLVPEQGGYKEKFTKAVEDKYKCEKCRLVLC
NPRQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNES
RGCAEQLTLGQLLVHLKNDCQFEELPCARADCKEKVLRRDLRDHVEKACKYREATCNHCK
SQVPMVTLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKRYGCVF
QGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggagtcgagtaaaaagatggactccatgggtgccctgcagaccaaccccccactgaag
ctgcagcccgaccgcagcggcagctccgtgttggtccccgagcagggaggctacaaggag
aagttcaccaaggccgtggaggacaagtacaagtgtgagaagtgccgcctggtgctgtgc
aaccccaggcagaccgagtgtgggcaccgcttctgcgagagctgcatggccgccctgctg
agctcctcgagtccaaaatgtacagcgtgtcaagaaagcatcgttaaagacaaggtattt
aaagataattgctgcaagagagagatcctggcccttcagatctactgtcggaatgagagc
agaggctgtgcagagcagttaacactgggacagctgctggtgcacctaaaaaatgactgc
cagtttgaggaacttccctgtgcacgcgctgattgtaaagaaaaagtgttgagaagagac
ctgcgcgatcacgtggaaaaggcctgcaaataccgcgaggccacatgcaatcactgcaaa
agccaagtcccgatggtcacactgcagaaacatgaagacaccgagtgtccctgtgtggtg
gtatcctgtcctcacaagtgcagcgtccagactcttctgaggagcgagttgagtgcacac
ttgtcagagtgtgtcaatgcccccagcacctgtagctttaagcgctatggctgcgttttt
caggggacgaaccagcagatcaaggcacatgaggccagctccgcagtgcagcacgtcaac
ttgctgaaggagtggagcaactcgctggagaagaaggtttccttgctgcagaatgaaagc
gtagaaaaaaacaagagcatacaaagtttgcacaatcagatatgtagctttgaaattgaa
attgagagacaaaaggaaatgcttcggaataatgaatccaaaatacttcatttacagcga
gtaatagacagccaggcggagaaactgaaggagctggacaaggagatccgtcccttccga
cagaactgggaggaggccgatagcatgaagagcagcgtggagtccctccagaaccgtgtg
accgagctggagagtgtggacaagactgcggggcaggcagctcggaacacaggcttgctg
gagtcccagctgagccggcacgaccagatgctgagtgtgcacgacatccgcctggccgac
atggacctgcggttccaggtcctcgagactgccagctacaacggcgtgctcatttggaag
atccgagactataagcgccggaagcaggaggccgtcatggggaagaccctgtctctttac
agccagcccttctacacgggctactttggctataagatgtgtgccagggtctacctcaac
ggagatgggatggggaaggggacgcacttgtctctcttttttgtcattatgcgcggagaa
tacgatgctttgctgccgtggccgttcaagcagaaagtgacgctcatgttgatggatcaa
gggtcctctcggcgccatctgggagatgcgttcaagcccgaccccaacagcagcagcttc
aagaagcccaccggagagatgaatattgcctctggctgccccgtctttgtggcccaaact
gttctagaaaatgggacgtatattaaagatgatacgatttttattaaagtcatagtggat
acttcggatctgcctgacccctga

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