Sciurus carolinensis (gray squirrel): 124976672
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Entry
124976672 CDS
T08117
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04064
NF-kappa B signaling pathway
ncar04620
Toll-like receptor signaling pathway
ncar04621
NOD-like receptor signaling pathway
ncar04622
RIG-I-like receptor signaling pathway
ncar04657
IL-17 signaling pathway
ncar04668
TNF signaling pathway
ncar04936
Alcoholic liver disease
ncar05160
Hepatitis C
ncar05161
Hepatitis B
ncar05162
Measles
ncar05164
Influenza A
ncar05165
Human papillomavirus infection
ncar05167
Kaposi sarcoma-associated herpesvirus infection
ncar05168
Herpes simplex virus 1 infection
ncar05169
Epstein-Barr virus infection
ncar05171
Coronavirus disease - COVID-19
ncar05200
Pathways in cancer
ncar05203
Viral carcinogenesis
ncar05222
Small cell lung cancer
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
124976672
04668 TNF signaling pathway
124976672
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124976672
04621 NOD-like receptor signaling pathway
124976672
04622 RIG-I-like receptor signaling pathway
124976672
04657 IL-17 signaling pathway
124976672
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124976672
05203 Viral carcinogenesis
124976672
09162 Cancer: specific types
05222 Small cell lung cancer
124976672
09172 Infectious disease: viral
05161 Hepatitis B
124976672
05160 Hepatitis C
124976672
05171 Coronavirus disease - COVID-19
124976672
05164 Influenza A
124976672
05162 Measles
124976672
05168 Herpes simplex virus 1 infection
124976672
05167 Kaposi sarcoma-associated herpesvirus infection
124976672
05169 Epstein-Barr virus infection
124976672
05165 Human papillomavirus infection
124976672
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124976672
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
124976672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
zf-C3HC4_2
MPS2
zf-RING_UBOX
ATG16
zf-RING_4
zf-RING_5
Tropomyosin
Spc29
Crescentin
KxDL
FliJ
GAS
DUF3450
LMBR1
DUF1664
T3SSipB
SPATA24
V_ATPase_I
THOC7
BLOC1_2
ADIP
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
124976672
NCBI-ProteinID:
XP_047395409
EnsemblRapid:
ENSSCRG00010005588
LinkDB
All DBs
Position
2:197494928..197596724
Genome browser
AA seq
567 aa
AA seq
DB search
MESSKKMDSMGALQTNPPLKLQPDRSGSSVLVPEQGGYKEKFTKAVEDKYKCEKCRLVLC
NPRQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNES
RGCAEQLTLGQLLVHLKNDCQFEELPCARADCKEKVLRRDLRDHVEKACKYREATCNHCK
SQVPMVTLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKRYGCVF
QGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgagtaaaaagatggactccatgggtgccctgcagaccaaccccccactgaag
ctgcagcccgaccgcagcggcagctccgtgttggtccccgagcagggaggctacaaggag
aagttcaccaaggccgtggaggacaagtacaagtgtgagaagtgccgcctggtgctgtgc
aaccccaggcagaccgagtgtgggcaccgcttctgcgagagctgcatggccgccctgctg
agctcctcgagtccaaaatgtacagcgtgtcaagaaagcatcgttaaagacaaggtattt
aaagataattgctgcaagagagagatcctggcccttcagatctactgtcggaatgagagc
agaggctgtgcagagcagttaacactgggacagctgctggtgcacctaaaaaatgactgc
cagtttgaggaacttccctgtgcacgcgctgattgtaaagaaaaagtgttgagaagagac
ctgcgcgatcacgtggaaaaggcctgcaaataccgcgaggccacatgcaatcactgcaaa
agccaagtcccgatggtcacactgcagaaacatgaagacaccgagtgtccctgtgtggtg
gtatcctgtcctcacaagtgcagcgtccagactcttctgaggagcgagttgagtgcacac
ttgtcagagtgtgtcaatgcccccagcacctgtagctttaagcgctatggctgcgttttt
caggggacgaaccagcagatcaaggcacatgaggccagctccgcagtgcagcacgtcaac
ttgctgaaggagtggagcaactcgctggagaagaaggtttccttgctgcagaatgaaagc
gtagaaaaaaacaagagcatacaaagtttgcacaatcagatatgtagctttgaaattgaa
attgagagacaaaaggaaatgcttcggaataatgaatccaaaatacttcatttacagcga
gtaatagacagccaggcggagaaactgaaggagctggacaaggagatccgtcccttccga
cagaactgggaggaggccgatagcatgaagagcagcgtggagtccctccagaaccgtgtg
accgagctggagagtgtggacaagactgcggggcaggcagctcggaacacaggcttgctg
gagtcccagctgagccggcacgaccagatgctgagtgtgcacgacatccgcctggccgac
atggacctgcggttccaggtcctcgagactgccagctacaacggcgtgctcatttggaag
atccgagactataagcgccggaagcaggaggccgtcatggggaagaccctgtctctttac
agccagcccttctacacgggctactttggctataagatgtgtgccagggtctacctcaac
ggagatgggatggggaaggggacgcacttgtctctcttttttgtcattatgcgcggagaa
tacgatgctttgctgccgtggccgttcaagcagaaagtgacgctcatgttgatggatcaa
gggtcctctcggcgccatctgggagatgcgttcaagcccgaccccaacagcagcagcttc
aagaagcccaccggagagatgaatattgcctctggctgccccgtctttgtggcccaaact
gttctagaaaatgggacgtatattaaagatgatacgatttttattaaagtcatagtggat
acttcggatctgcctgacccctga
DBGET
integrated database retrieval system