Sciurus carolinensis (gray squirrel): 124977205
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Entry
124977205 CDS
T08117
Name
(RefSeq) protein PML-like isoform X1
KO
K10054
E3 SUMO-protein ligase PML [EC:2.3.2.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04120
Ubiquitin mediated proteolysis
ncar04144
Endocytosis
ncar05164
Influenza A
ncar05168
Herpes simplex virus 1 infection
ncar05200
Pathways in cancer
ncar05202
Transcriptional misregulation in cancer
ncar05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124977205
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124977205
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124977205
05202 Transcriptional misregulation in cancer
124977205
09162 Cancer: specific types
05221 Acute myeloid leukemia
124977205
09172 Infectious disease: viral
05164 Influenza A
124977205
05168 Herpes simplex virus 1 infection
124977205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124977205
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124977205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PML_CC
PML_C
ANCHR-like_BBOX
zf-B_box
zf-C3HC4_3
zf-C3HC4
Nop16
DUF1340
CoV_S2
Motif
Other DBs
NCBI-GeneID:
124977205
NCBI-ProteinID:
XP_047396553
LinkDB
All DBs
Position
2:complement(82096420..82138392)
Genome browser
AA seq
887 aa
AA seq
DB search
MQQEPASARSPGLQQDPVLPHTPTMPPPDSPSGGHQPSHSPAEQSMEEEFQFLHCQGCQA
QAKCPKLLPCLHTLCSGCLEAPGLQCPICQAPQPQGADSPALDNVFFESLQRRLSMYRQI
LDVQAACTRCREPADFWCFECEQLLCAKCFEAHQWFLKHEARPLAELRSQSAREFLDGTR
KSNNIFCSNPNHRTPALTSIYCRGCSKPLCCSCALLDRDHSDLKCDISAEIQQRQEELDA
MTQALQEQDSTFSAAHAQMRSAIGQLGRARADTEELISTRVRQVVAHVLAQERELLEAVN
ERYQRDYEEMACQLGRLDAVLQRIRTGGALVQRMKRYASDQEVLDMHDFVHKALSRLRQE
EPQSPQATLRTDCFEEFKVRVQDLISCITHGTDAAVPRRASPETSRTPKEPFDVDLPDEA
ERVQAQALAEAQSVAVVQSVPGAHPVPLYAFSIKGSSYRESHLTQPVTPPAQEVSNTTTP
QKRKSCHTQCSRKVIKLESEEENEARLAPSSPEQPRPSTSKAVSPPHLDGPPSPESPIIG
KEVLLPNNNHVTGDTGEAEERIVVISSSEDSDAENSSSRELDDSSSESSDLQLEGPSSLR
VLDESLADPRAEDRPLVFFDLKIDNETQKISQLAAVNRESKFRVLIQPEAFSIYSKAVSL
EVGLQHFLSFLSSMRRPILACYKLWGPGLPNFFQALEDINKLWEFQEAISGFLAALPLIR
ERVPGARSFKLKNLAKTYLARNMSERSALAAVLAMRDLCRLLEVSPGPQLAQHVYPFNSL
QCFASLQPLVQASVLPRAEARLLALHNVSFLELLTAYRSNPQRGLKRYSRYLSLQTTSSP
PAQPAVYLQALSTYLEGLLEGPALARAEGSSTTLTGRSLAEKAPQQS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggagcctgcatccgcccgatctcccggcctccagcaggaccctgtcctgcct
cacacgcccacaatgcctcccccggactccccctccggaggccaccagcccagccacagc
ccggcagagcagtccatggaagaagagttccagttcctgcactgccagggatgccaggca
caagccaagtgccccaagctgctgccttgcttgcatacactgtgctcaggatgcttggag
gcgccgggcctgcagtgccctatctgccaggcaccccagccccagggcgctgactctccg
gccctggataacgtattctttgagagcttgcagcggcgcctgtccatgtacaggcagatc
ctggatgtgcaggcggcttgcacccgctgcagagagccagctgacttctggtgcttcgag
tgtgagcagctcctctgtgccaaatgctttgaggcacatcagtggttcctcaagcacgag
gctcgacccctggctgagctccgcagccagtccgctcgtgagttcctggatggcacgcgc
aagtccaataacatcttctgctccaaccccaaccaccgcacccctgcgctgactagcatt
tactgccgaggctgctccaagccactgtgctgctcctgcgcgctcctggacagagaccac
agcgacctcaagtgcgacatcagtgcggagatccagcagcggcaggaggagttggacgct
atgacacaggcactgcaggagcaggacagtaccttcagcgccgcgcacgcacagatgcgc
tcagccattggccagctgggtcgcgcgcgcgcagatacagaggagctgatcagcactcga
gtgcgccaagtggtagcccacgtgctggcacaggagcgcgagctgctggaggcagtgaat
gaacggtaccagcgagattacgaagagatggcctgccagcttggtcgcctggatgctgtg
ctgcaacgcatccgcactggcggtgcactggtacagaggatgaagcgctacgcctccgac
caggaggttctggacatgcacgacttcgtgcacaaggcactcagccgcctgcgccaggag
gagccccagagcccgcaagctaccctgcgcactgactgctttgaggagttcaaggtgcgc
gtacaggacctcatctcttgcatcacccatggaacagatgcagctgtacccaggagagcc
agcccagagacttctagaactcccaaggagccttttgatgttgacttgccggacgaggca
gagagggtacaggcccaggccttggctgaggcacaatctgtggctgtggtacagtcggtg
cccggagcacaccctgtgccactgtatgccttctccatcaaaggctcctcctacagagag
agtcacctaacccagcctgtgactccccctgcacaggaggtctccaacacaaccaccccc
cagaagaggaagtcctgccacacccagtgctccaggaaggtcattaagttggagtctgag
gaggagaatgaggcaagattggccccaagctccccggagcagcccagacccagtacctcc
aaggcagtctcacctccccacctggatgggccccccagccctgagagccccatcatagga
aaagaggtcctcctgcccaacaacaaccacgtgactggcgacactggggaggcagaggag
cgcatcgttgtgatcagcagctcagaagactcagatgctgagaactcgtcctcccgagag
ctggatgacagcagcagcgagtccagtgacctccagctggagggccccagctccctcagg
gtcctggatgagagcctcgccgacccccgagcagaagacaggcccctggttttctttgac
ctcaagattgacaatgaaacccagaagattagccagctggcagctgtgaaccgggagagc
aagttccgtgtgctcatccagccggaggccttcagcatctactccaaggccgtctccctg
gaggtggggctgcagcacttcctcagtttcctcagctctatgcgccgccccatcttggcc
tgctataaactatgggggcccggacttcccaatttcttccaggccctggaggacattaac
aagctgtgggaattccaggaggccatctcgggcttcctggctgctctgcccctcatccgg
gagcgtgtgcccggggccaggagcttcaaactcaagaatctggctaagacctacctagcg
agaaacatgagtgagcgcagtgccctggctgctgtgctggccatgcgtgacctgtgccgc
ctccttgaggtctctccgggcccacagctggcccagcacgtctaccctttcaacagcctg
caatgcttcgcctccctgcagcctctggttcaggcatccgtcctgccccgggctgaagcc
cgcctcctggccctgcacaatgtgagcttcctggagctgctgaccgcataccgcagtaac
cctcagcggggcttgaagaggtacagccgctacctgagcctgcagaccacctcatcaccc
cctgcccagcctgctgtctacctgcaggctctgagcacctacttggaaggtctgttggag
ggcccggccttggcacgggcagaaggcagctctaccactctcactggccgcagcttggca
gaaaaggccccccagcagagctga
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