Sciurus carolinensis (gray squirrel): 124978941
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Entry
124978941 CDS
T08117
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00514
Other types of O-glycan biosynthesis
ncar04330
Notch signaling pathway
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124978941
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124978941
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124978941
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124978941
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
124978941
Glycosyltransferases [BR:
ncar01003
]
Glycan extension
O-Glycan
124978941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
124978941
NCBI-ProteinID:
XP_047398874
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All DBs
Position
3:1000749..1004065
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AA seq
329 aa
AA seq
DB search
MSRARGALCRACLALAAALAALLLLPLPLPLPLPRAPAPAPGPVPTRAAPRLRPDDVFIA
VKTTRKNHGPRLRLLLRTWISRARRQTFIFTDGDDPELQPLGAGSHIINTNCSALRTRQA
LCCKMSVEYDKFIESGRKWFCHVDDDNYVNPEGLLHLLSAFSPSQDVYLGRPSLDHPIEA
TERVPGGGTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERLRLPDDCTVGY
IVEGLLGARLLHSPLFHSHLESLQRLPPEAVLQQVTLSYGGPENPHNVVNVAGGFSLQQD
PTRFKSVHCLLYPDTDWCPTQSGGDLTSR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgcggggcgcgctgtgccgggcctgcctcgcgctggccgcggccctggcc
gcgctgctgttgctgccgctgccgttgccgctgccgctgccgcgcgcgcccgccccggcc
ccgggccccgtcccgacccgcgccgcgccccgcctgcggcccgacgacgtcttcatcgcg
gtcaagaccacccgcaagaaccacgggccgcgcctgcggctgctgctgcgcacctggatc
tcgcgcgcccgccggcagacgttcatcttcaccgacggagacgaccctgagctccagccg
ctgggagcaggcagccacatcatcaacaccaactgctctgccctgcgcacccgccaggcc
ctctgctgcaagatgtccgtggagtatgacaagttcatcgagtcaggtcgcaagtggttc
tgtcacgtggatgatgacaactacgtgaaccccgagggcttgctgcacctgctgtccgcc
ttctctcccagccaggacgtctacctggggagacccagcctggaccaccccatcgaggcc
actgagagggttcctggaggaggcactgtgaccacggtcaagttctggtttgccactggt
ggggcggggttttgcctgagcaggggccttgctctcaagatgagtccatgggccagcctg
ggcagcttcatgagcactgccgagcgcctgcggctgccggacgactgcacggtgggctac
atcgtggaggggctgctgggtgctcgcctgctgcacagccccctcttccactcgcacctg
gagagcctgcagaggctgccgccagaggccgtgctccagcaggtcaccctaagctacggg
ggtcccgagaacccacataatgtggtgaacgtggccggaggcttcagtctgcagcaagac
cccacacggtttaagtctgtgcactgccttctgtacccagacacggactggtgtcccacg
cagagtgggggtgacctcacctctcggtga
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