Sciurus carolinensis (gray squirrel): 124979229
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Entry
124979229 CDS
T08117
Name
(RefSeq) Bardet-Biedl syndrome 5 protein homolog isoform X1
KO
K16748
Bardet-Biedl syndrome 5 protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124979229
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
BBSome
124979229
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Gene cluster
GFIT
Motif
Pfam:
BBL5
Vps36_ESCRT-II
bPH_3
Voldacs
PH_TFIIH
PH_30
Motif
Other DBs
NCBI-GeneID:
124979229
NCBI-ProteinID:
XP_047399683
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Position
3:119444891..119467304
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AA seq
341 aa
AA seq
DB search
MSVLDVLWEDRDVRFDVSSQQMKTRPGEVLIDCLDSIEDTKGNNGDRGRLLVTNLRIIWH
SLALPRVNLSIGYNCILNITTRTANSKLRGQTEALFILTKCNSTRFEFIFTNLVPGSPRL
FTSVIAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQEHVYDKINGVWNLSSDQGNLGTF
FITNVRIVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVLGFKIDPV
EKLQESVKEINSLHKVYSASPIFGVDYEMEEKPQPLEALTVEQIQDDVEIDADDHTDAFV
AYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEVMS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgttggacgtgctttgggaagaccgagacgttcgtttcgacgtgtcctcgcag
caaatgaaaaccagacctggagaagtccttattgattgtttagattcaattgaagatacc
aagggaaataatggagatagaggtagactcttagtaacaaatttaagaattatctggcac
tctttggcacttcccagagtcaatctttctatcggttacaactgcatattgaatattaca
acaaggactgctaactctaaattacgaggtcaaactgaagctctttttatactaacaaaa
tgtaacagcactcgctttgaatttatatttacaaatttggttcctggaagtcctagactt
tttacttctgtgattgcagtacacagagcatatgaaacttctaaaatgtatcgtgatttt
aaattgagaagtgcactgattcaaaacaaacaactaagattattaccacaagaacatgta
tatgacaaaatcaatggagtatggaacttatccagtgatcagggaaatttaggaaccttt
tttattaccaatgtgagaatcgtgtggcatgcaaatatgaatgatagttttaatgtcagt
ataccatatctgcaaattcgttccataaagattagagattcaaaatttggtttagctctt
gtcatagaaagctcccaacagagtggaggttatgttcttggctttaaaatagatcctgtg
gaaaaactacaggaatcagttaaggaaatcaattcacttcacaaagtctattctgccagt
cctatatttggagtggattatgaaatggaagaaaagccacagccccttgaagctctgaca
gttgaacagattcaagatgatgtagaaatagatgctgatgatcacacggatgcttttgtg
gcttattttgctgatggcaataagcaacaggatcgtgaacctgtattttcagaagaactg
gggcttgcaatagagaaattgaaggatggattcacactacagggactttgggaagtaatg
agttga
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