KEGG   Sciurus carolinensis (gray squirrel): 124979235
Entry
124979235         CDS       T08117                                 
Name
(RefSeq) lysine-specific demethylase 6B isoform X1
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncar03036]
    124979235
Enzymes [BR:ncar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     124979235
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124979235
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL TPR_2 TPR_7
Other DBs
NCBI-GeneID: 124979235
NCBI-ProteinID: XP_047399692
LinkDB
Position
3:complement(51899309..51920741)
AA seq 1648 aa
MHRAVDPPGARTAREAFALGGLSCAGAWSSCPPHPPPRGAWLPGGRCSASIGQPPLPAPL
PTSHGSSSGHPNKPYYAPGTPAPRPLHGKLESLHGCVQALLREPAQPGLWDQLGQLYESE
HDNEEAIRCYHSSLRYGGNFSELGPRIGRLQQAQLWNFHTGSCQHRAKILPPLEQVWNLL
HLEHKRNYGAKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCSSEQTGL
PPGLPLPPPPLPPPPPPPPPPPLSGLATSSPFQLAKPGLWSTLHGDAWGPERKGSAPTER
QEQRHSLPHPYPYPAPAYTAHPPSHRLVPATPPGPSPRPPGAESHGCLPATRPPGSDLRE
SRVQRSRMDSSVSPAATTACVPYAPSRPPGLPSTTSSSSSSSSNTGLRGVEPNPGIPGAD
HYQTPALEVSPHQGRLGSSAHNSRKPFLAAPAAAPHLSLPPGPPSSPPPPCPRLLRPTPP
PAWLKGQACRATREDGEILEELFFGAEGPPRPPHLPHREGFLGPPAPRFSVGTQDSHTPT
TPSTTSSSSSSNNGSHSSSSPTGPVPFPPPPYLARSMDSLPRPPSPTLSPQDPPLAPLTL
ALPPAPPSSCHQNTSGSFRRPESPRPRVSFPKTPEVGPGPPPGPLSKAPQPVTPGVGELP
ARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMKMLDESIRKEEEQQQQEAGVVPPPP
LKEPFASLQPPFPSDTVPTTTAATASATTTTTTTTTTTTTTQEEEKPPPALPPPPPLAKF
PPPPQPQPQQPPLPPPANPASLLKSLASVLEGQKYCYRGTGTAVSTRTGPLPTTQYSPGP
PSGATAPPPTSVVPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEPAPGPVTPAQPPPP
LPLPPARSESEVLEEISRACETLVERVGRSAINPVDTADPVDSGTERLMPSAQTKEESGG
VVAVVATGPGSGKRRQKEHQKEHQKEHRRHRRACKDSVGRRPREGRAKAKTKTPKEKSRR
VLGNLDLQSKEIQGREKARPDLGGASKAKPPTAPAPPPTPAPSAQPTPPSASVPGKKARE
ETPGPPGVSRADMLKLRSLSEGPPKELKIRLIKVESGDKETFIASEVEERRLRMADLTIS
HCAADVVRASKNAKVKGKFRESYLSPAQSVKPKINTEEKLPREKLNPPTPSIYLESKRDA
FSPVLLQFCTDPRNPITVIRGLAGSLRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDEN
WDLTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEKESEDEESEEPDSTTGTPPSS
SAPDPKNHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNT
VQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTG
SWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQL
ALERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCLLQSMKHCQVQRESLV
RAGKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRSAGLQG
VVVLEQYRTEELAQAYDAFTLAPASSSR
NT seq 4947 nt   +upstreamnt  +downstreamnt
atgcatcgggcagtggaccctccaggggcccgcactgcacgggaagcctttgcccttggg
ggcctgagctgtgctggggcctggagctcctgcccgccccatccccctcctcgaggcgca
tggctgcctggaggcagatgctcagccagcatcgggcagcccccactccctgctccccta
cccacttcacacggcagtagctctggacatcccaacaaaccatattatgctccagggaca
cccgccccaagacccctccatggaaagctggaatccttgcatggctgtgtgcaggcattg
ctccgggagccagcccagccagggctgtgggatcaacttgggcagctgtatgagtcagaa
catgataatgaggaggccatacgctgttaccacagctcccttcgatatggaggaaacttt
tctgagctgggaccccgcattggccgactgcagcaggctcagctctggaactttcatact
ggctcctgccagcacagagccaagatccttcctcctctggagcaagtgtggaacttgctg
caccttgagcacaagcggaactatggagctaagcgagggggtccccctgtgaagcgagct
gctgaacccccagtggtgcagcctgttcctcctgcagcactttcaggtccctcaggggag
gagggccttagccctggaggcaaacgcaggagaggctgcagttctgaacagactggcctt
cccccagggctgccactgcctccaccaccattaccaccaccaccaccaccaccaccacca
ccacccctgtctggcctggctacaagctccccatttcagctggccaagccagggctatgg
agtaccctgcacggagatgcctggggccctgagcgcaagggttcagcacctacagagcgc
caggagcagcggcactcgctgcctcacccatatccatacccagctccagcctacactgcg
cacccccccagtcaccggctggtcccagccacacccccaggccccagcccccgcccccca
ggagcagagagccatggctgcctgcctgccacccgtccccccggaagtgaccttagagag
agcagagttcagaggtcgcggatggactccagcgtttcaccagcagcaactaccgcctgc
gtgccttacgccccttcccggccccctggcctccccagtaccaccagcagcagcagtagc
agcagcagcaacaccggtctccggggtgtggagcccaacccaggcattcctggcgctgac
cattaccaaactcctgcgctggaggtctcccctcaccagggtcgcctagggtcctcggca
cacaacagtcgaaaaccgttcttggcggctcctgctgctgctccccacctgtccctgcca
cctggacccccctcttcccctccacccccctgtccccgcctcttacgccccaccccaccc
cctgcctggctgaagggccaggcttgccgggcaacccgagaggatggagagatcttagaa
gagctcttctttggggctgaggggccccctcgccctccccaccttccccaccgcgagggc
tttttggggcctccagccccccgcttttctgtgggcactcaggattcacacacccctacc
actccctcaaccaccagcagtagcagcagcagcaacaatggcagccacagcagcagcagc
cctactgggcctgtgccctttcccccacctccttatctggccagaagtatggactccctt
ccccggccacccagcccaacactgagtccccaggacccacctcttgcacccctgactctt
gccctgcctccagctcctccctcatcctgccaccaaaatacctcaggaagcttcaggcgc
ccggagagcccccggcccagggtctccttcccaaagacccccgaggtggggccagggcca
cccccaggccccctgagtaaagccccccagcctgtgacgcctggggttggggagctgcct
gcaagaggcccacgactctttgattttcccccaaccccactggaggaccaatttgaggag
ccggctgagttcaagattctaccggatgggctggctaacatcatgaagatgctggatgaa
tcaattagaaaggaggaggaacagcagcagcaggaggcaggcgtggtccctccacccccg
ctgaaggaaccctttgcatctctgcagcctccattccccagcgacacagtcccaaccacc
actgctgccacagcttctgccaccaccactaccaccaccaccaccaccaccaccaccacc
acccaggaagaggagaagccaccaccagccctgccaccaccaccacctctagccaagttc
cctccgcctccccagccacaaccacaacagcccccgctgcccccaccagccaatccagcc
agcttgctcaaatccttggcttctgtgctggagggacaaaagtactgttatcgggggact
ggaacagctgtttccacccgaactgggcccttgcccaccactcagtattcccctggtccc
ccatcaggtgctaccgccccaccacccacctcagtggtccctagcgcccagggctcccca
cagccctctgcttcctcgtcatctcagttctctacctcaggcgggccctgggcccgggag
cgcagggctggtgaagagccagctccaggcccggtgacccctgcccagccacccccaccc
ttgccactgccccctgctcgctctgagtctgaggtgctagaagagatcagtcgggcttgt
gagacccttgtggagcgggtgggccggagtgccatcaacccagtggacactgcagaccca
gtggacagtggaactgagcgactgatgccttctgcacagaccaaggaggaaagtggtggg
gtggtggctgtggtagcaacgggaccaggtagtggcaagcggcggcagaaggaacatcag
aaggagcaccagaaggagcatcgtaggcacaggagggcctgtaaggacagtgtgggtcgg
cggccccgtgaggggagggccaaggccaagaccaagacccccaaagaaaagagccgccgg
gtgctagggaacctggacctacagagcaaggagatccagggtcgggagaaggcccgacct
gatcttggtggggcatccaaggccaagccacccacagctcctgcccctccaccaactcct
gctccctctgcccagcccacacccccatcagcctctgtccctgggaagaaggctcgagag
gaaactccagggcccccaggtgtcagtcgtgctgacatgctaaagctgcgctcacttagt
gaggggccccccaaggagctgaagatcaggctcatcaaggtagagagtggtgacaaggag
accttcatagcctctgaggtagaagagcggcgattgcgcatggcagacctcaccattagc
cactgtgctgctgatgttgtgcgtgccagcaagaatgccaaggtaaaagggaaatttcga
gagtcctacctttcccctgcccagtctgtgaaaccgaagatcaacactgaggagaaactg
ccccgggaaaaactcaaccctcctacacccagcatctatctggagagcaaacgggatgcc
ttctcaccagtgctgctgcagttttgtacagatcctcgaaatcccatcacagtgatccga
ggcctggcaggctccctgcggctcaacttgggcctcttctccaccaagacgctggtggag
gcgagtggtgagcacaccgtcgaggtgcgcacacaggtacagcagccctcagatgagaac
tgggacctgactggcacacgacagatctggccctgtgagagctctcgttcccacaccacc
attgccaagtatgcacagtaccaggcctcctccttccaggagtcgttacaggaggagaag
gagagtgaggatgaggagtccgaggagccagacagcaccacaggaactcctcctagcagc
agtgcaccagacccgaagaaccatcacatcatcaaatttggcaccaatatcgacctctct
gatgccaagcggtggaagccccagctgcaggagctgctgaagctgccggctttcatgcgg
gtaacatccacaggcaacatgctcagccacgtgggccacaccatcttgggcatgaatacc
gtacagctgtacatgaaagttcctggcagccgaacaccaggccaccaagagaacaacaat
ttctgctccgtcaacattaacattggcccaggtgattgcgaatggtttgcagtgcacgag
cactactgggagaccatcagcgccttctgtgaccggcacggcgtggactacttgacgggt
tcctggtggccaattctggatgacctctatgcttccaatatccctgtgtaccgctttgtg
cagcgccctggagaccttgtgtggattaatgcgggaactgtgcactgggtgcaggccact
ggctggtgcaacaacattgcctggaatgtggggcccctcaccgcctatcagtaccagctg
gccctggaacgatatgagtggaacgaggtgaagaacgtcaaatccattgtgcccatgatt
catgtgtcctggaatgtggcccgcacggtcaaaatcagcgaccccgacttgttcaagatg
atcaagttctgtctcctgcaatccatgaagcactgccaagtgcaacgtgagagcctggtg
cgggcagggaagaagatagcataccagggccgagtcaaggacgagcccgcctactactgc
aacgagtgcgatgtggaggtattcaatatcctgttcgtgacgagtgagaatggcagccgc
aacacatacctggtgcactgcgagggctgtgcgcggcgtcgcagcgcaggcctacagggc
gtagtggtgctggagcagtaccgcactgaggagctggctcaggcctacgacgccttcacg
ctggcccccgccagctcgtcgcgatga

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