KEGG   Sciurus carolinensis (gray squirrel): 124979613
Entry
124979613         CDS       T08117                                 
Name
(RefSeq) period circadian protein homolog 2-like isoform X1
  KO
K02633  period circadian protein 2
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04710  Circadian rhythm
ncar04713  Circadian entrainment
ncar05202  Transcriptional misregulation in cancer
ncar05221  Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    124979613
   04713 Circadian entrainment
    124979613
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    124979613
  09162 Cancer: specific types
   05221 Acute myeloid leukemia
    124979613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124979613
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    124979613
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 124979613
NCBI-ProteinID: XP_047400008
LinkDB
Position
3:complement(180704941..180745158)
AA seq 1285 aa
MADADAAGRFVLEPNMNGYAEFSPSATKEPMDPQPSQALLQEDVDMSSGSNETNESSSAG
RDSQGSDCDDGKELRMLLEPPDTLQGPGAFHLQMMEPERNPSTSGCSSEQSAKADTHREL
IRTLRELKVHLPADKQAKGKASTLATLKYALRSVKQVKANEEYFQLLPSSEGQPCRADVP
SYAVEQVGGVASEHLLKNADMFAVAVSLVTGKILYISDQVTSVFRCKKDAFGDAKFVEFL
APQDVSVFHSFTTPCKLPPWSTCSGVDSFTQECMEAKSFFCRLGVGKNHENEIRYQPFRM
TPYLAKVQEQPAAESQLCCLLLVERVHSGYEAPRIPPEKRIFTTTHTPNCLFQDVDERAV
PLLGYLPQDLIETPVLLQFHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRTRNGEYVTLD
TSWSSFVNPWSRKISFIIGRHRVRVGPLNEDVFAALPCAEEKALQPSVQELTEQIHRLLL
QPVPHSGSSGYGSLGSNGSHEHLMSQTSSSDSNGHEESRQRRSEIYENGTKTKSRGRFPH
EFGEQKKASGTEIQSLPATEEDSLGASVPRAGIPEELACKDQPACSYQQISCLDSVIRYL
ESCSEAASLKRKCEFPANIPSPKATASPGLRPAGPPQTPSSGIPAEDSNVHARPLLLWNS
LFSPFSIEGTQHRHQACVTLMQPPVPQSLRLFLPLSLQGWCHPPSQCSYSSTIVHVGDKK
PQPESEMVEEAASGPESLDCLPHSVSQEKGPLQALGLTKEVLAAHTQREEQSFLQKFRGA
RRLGPLQAHGHCYSREQPRGPSSERTVPGLSTSRTDSSWKKAGKSRKLKSRRAKPRGPVQ
STGPGGLERPRHPLVNPGAMAWSPSDTCPSSCPAVAFPTPVPTFPLPMFPAPGTVAPPPA
APHSGLVMPALPMDSRHEFAVQPLPVPAPWAPVMALMLSAYPSPPVAPSLPQACFPGQPH
FPGHPMLPSEMTPASRPECPRQTSLPRQPCTCPATQPSATVATGRASPPLFQSRGSSPLQ
LNLLQMEEPPEGSAGAAATTGAATARPDCTPGISRDQQPKAPPTQDEPPEAQESDAVSVS
SDLLHLLLSEDLCSATGSALSGSGASAASESLGCTTSPSGAGSTDTSCISKYFGSIDSSE
NNHKAETSRDKEQSEHLMKCVLQDPVWLLMADTDDSVMMTYQLPSRALESVLREDREKLA
LLRRFQPCFTEGQRQELREVHPWVQTGGLPTAIDVAECIYCGSEEKGSVRLPYEGDVPSL
GLGDASDTQEEESGHPLSHREEGQT
NT seq 3858 nt   +upstreamnt  +downstreamnt
atggcggacgcggatgcggcggggcgcttcgttttggagcccaacatgaatggatatgca
gaattttccccgagtgccaccaaagagcccatggacccccagcccagtcaggccttgctc
caggaagacgtggacatgagcagcggctcaaatgaaaccaatgaaagcagctccgcgggg
cgggactcgcagggcagtgactgcgacgacgggaaggagctgaggatgctgctggagccc
cctgacaccctgcagggccccggggcctttcaccttcagatgatggagcctgagcgcaac
ccatctaccagtggctgcagcagcgagcaatctgccaaagcagacacgcacagagagctg
ataagaacgctgcgggagctgaaggtccacctccctgcagacaagcaggccaagggcaag
gccagcaccctggcgaccctcaagtacgccctgaggagcgtaaagcaggtgaaagcaaat
gaggagtatttccagctgctcccgtccagcgaaggccagccctgcagggcagacgtgccc
tcctacgccgtggagcaggtggggggcgtcgcctccgagcacctcctgaagaatgcggat
atgtttgctgtggccgtgtccctggttacggggaagatcctgtacatctctgaccaagtc
acatccgtgttccgttgtaagaaagatgcctttggcgacgccaagtttgtggagttcctg
gcaccgcaagatgtcagcgtgttccacagcttcaccaccccttgcaagcttccgccctgg
agcacgtgcagtggagtagattcttttactcaagagtgcatggaggcgaaatctttcttc
tgccgtctgggcgtcgggaagaaccacgagaacgagatccgctaccagcctttccgcatg
acgccctacctagccaaggtgcaggagcagccggctgctgagagccagctctgctgcctg
ctgctggtagagagggtgcactccggctacgaagctcctagaattcctcctgagaagaga
atttttacaactacacatacaccaaattgcttgttccaggacgtggacgaaagagcggtc
cccctcctgggctacctacctcaggacctgatcgagacacctgtgctcctgcagttccac
cccagtgacaggcccttgatgctcgccatccacaaaaagatcctgcagtccggcgggcag
cctttcgactattctcccatccgcttccgcacccggaacggggagtacgtcaccctggac
accagctggtccagcttcgtcaacccgtggagcaggaagatttccttcatcatcgggagg
cacagagtcagggtgggccctttgaacgaggacgtgtttgcggcgctcccatgtgcagag
gagaaggccctgcagcccagcgtccaggagctgacggagcagatccaccggctgctgctg
cagccggtcccccacagtggctccagtggctacgggagcctgggaagcaacgggtcccac
gagcacctcatgagccagacctcctccagcgacagcaatggccacgaggaatctcgccag
aggagatccgagatttatgagaatggtaccaagaccaaaagcagaggtcgttttcctcat
gaatttggagaacaaaagaaagcatctggtacagaaattcagagtctcccagccacagaa
gaggacagtctgggggccagcgtgcctagggctggcatccccgaggagctggcctgcaag
gaccaacccgcctgctcctaccagcagatcagctgcctggacagtgtcatcaggtacctg
gagagctgcagcgaggccgcctccctgaagaggaagtgtgagttccccgcgaacatcccg
tcgccaaaggccacagccagcccggggctgcgcccagcagggccaccacagaccccgagc
agcggcatccctgccgaggactcgaatgtgcacgcgaggccgctcctgctttggaattcc
ctcttctcacctttctccattgaagggacacagcacaggcaccaggcctgtgtgactctc
atgcagccgcccgtcccacaaagcctgcgcctgttccttccgttgtctctgcaggggtgg
tgtcaccctccaagccagtgcagctacagcagcaccatcgtccacgtgggagacaaaaag
ccgcaacccgaatcagagatggtggaggaggcggcgagcgggcccgagtccctggactgc
ctgccccacagcgtcagccaggagaaggggcccctgcaggcgctgggcctcaccaaggaa
gtgctggctgcacacacgcagagggaggagcagagcttcctgcagaagttccgcggggcc
aggagactggggcctctccaggcgcacggccactgctactcacgggagcaaccccggggg
ccctcgagtgagcgcactgtccctggactgagtacttctaggacagactcgtcttggaaa
aaagcaggaaagagcagaaaactcaagtccagaagggccaagcctcgggggcccgtccag
agcacagggcccggggggctggagcgcccccggcacccactcgtcaacccaggtgccatg
gcctggtcaccctccgacacatgcccgtccagctgccctgctgtggccttccccacgcca
gtgcccacgttccccctgcccatgttcccagcgccaggcaccgtggcacccccacccgca
gctccccactctggccttgtgatgcctgctctgcctatggactcccggcacgagtttgca
gtccagcccctgcccgtcccagccccctgggccccggtcatggccctcatgctgtccgcc
tacccctccccacctgtggccccaagcctcccccaggcctgcttccctggccagcctcac
tttccaggccatcccatgctcccctccgaaatgactcctgcctcacggcccgagtgcccc
cgtcagacctcactccccagacagccctgcacatgcccagccacccaaccgtcagccaca
gtggccacgggcagggcctccccgccgctcttccagtcccgaggcagctcaccgctgcag
ctcaacctgctgcagatggaggagccacccgagggcagcgccggggccgcagcaaccact
ggagcagcaactgccaggccagactgcacacctggcatttctcgggaccagcagccaaag
gcacccccaacacaagacgagcccccagaggcgcaggagagcgatgccgtgtctgtgtcc
agcgacctgctccacctcctcctgagtgaggacctctgctctgccacggggtcagccctg
tctggcagtggggcttctgctgcctccgagtctctgggctgcaccacatcgcccagtggg
gcaggcagtactgacaccagttgtatcagcaaatactttggaagcatcgactcctcagag
aataaccacaaagcagaaaccagcagggacaaggagcaaagcgagcacttgatgaagtgc
gtcctgcaggaccccgtctggttgctgatggcggacacagacgacagcgtcatgatgacc
taccagctgccttcccgggctctggaatcggtcttgagggaggacagagagaagctggcg
ctgctgcggaggttccagccctgcttcactgagggccagaggcaggagcttcgtgaggtc
cacccatgggtccagacaggtggcctgcccacagccatcgacgtggcggaatgcatctac
tgcggaagtgaagagaaaggcagcgttcgcctgccatacgagggagacgttccttccctg
ggactcggggacgcgtcagacacccaagaagaggaaagcggacatcccctgagtcacagg
gaggaagggcagacgtaa

DBGET integrated database retrieval system