Sciurus carolinensis (gray squirrel): 124980060
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Entry
124980060 CDS
T08117
Name
(RefSeq) ceramide synthase 6 isoform X1
KO
K23727
sphingoid base N-palmitoyltransferase [EC:
2.3.1.291
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00600
Sphingolipid metabolism
ncar01100
Metabolic pathways
ncar04071
Sphingolipid signaling pathway
Module
ncar_M00094
Ceramide biosynthesis
ncar_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124980060
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
124980060
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.291 sphingoid base N-palmitoyltransferase
124980060
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GFIT
Motif
Pfam:
TRAM_LAG1_CLN8
Homeodomain
Motif
Other DBs
NCBI-GeneID:
124980060
NCBI-ProteinID:
XP_047401122
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Position
3:118536015..118821014
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AA seq
391 aa
AA seq
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MAGILAWFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVA
KPCAIALNIQANGPQIAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQR
RNQEKPSTLTRFCESMWKFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHY
YYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSILLITFSYVNNMARVGTLVLCLHDS
ADALLEAAKMANYAKFQKMCDLLFVMFAMVFITTRLGIFPLWVLNTTLFESWEIVGPYPS
WWVFNLLLLLIQGLNCFWSYLIVKIACKAVSKGKAGKWNPLHVSKDDRSDIESSSDEEDS
EPPGKNPHATTTNGTGGTNGYLLTGPCSMDD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatcttagcctggttctggaacgagaggttttggctcccgcacaatgtcacc
tgggcggacctgaagaacacggaggaagccaccttcccgcaggctgaggacctctatctc
gccttcccactggccttctgcatcttcatggtgcgacttatcttcgagagatttgtagcc
aaaccgtgtgccatagccctcaacattcaggccaacggaccacagattgcccagccgaat
gccattttggaaaaagtcttcactgcaattacaaagcatcctgatgagaagagattagag
ggcctctccaagcaactggactgggatgtccgaagcattcagcgctggtttcgacaacga
cgcaaccaagagaagcccagcaccctgaccaggttctgtgagagcatgtggaaattttca
ttttacctctacgtattcacctacggagtccggttcctgaaaaagaccccgtggttgtgg
aatacaagacactgctggtacaactatccctatcagccgctcacaaccgaccttcactac
tattacatcctggagctgtcattttattggtctttaatgttttcccaattcacagatatc
aaaaggaaggactttggcatcatgttcctgcaccacctcgtctccattttactgattact
ttttcatatgtcaacaatatggcccgagtagggaccctggtcctttgtcttcacgactca
gctgatgctcttctagaggctgccaaaatggcaaattacgccaagtttcagaaaatgtgt
gacctcctgtttgttatgtttgccatggtttttatcaccacacggctgggtatatttcct
ctctgggtgttaaacaccacattatttgagagctgggagatcgttggaccttacccttcc
tggtgggtttttaacctcctgctgttgctaatacaagggttgaactgcttctggtcttac
ctgattgtaaaaatagcttgcaaagctgtttcaaaaggcaaggctgggaagtggaaccct
ttacatgtgtccaaggatgatcgaagtgatattgagtctagctcagatgaggaggactca
gaacctccaggaaagaacccccacgctacaactaccaatgggaccggtggtaccaatggg
tatctcctgaccggtccttgctccatggatgattaa
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