Sciurus carolinensis (gray squirrel): 124981379
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Entry
124981379 CDS
T08117
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04340
Hedgehog signaling pathway
ncar04390
Hippo signaling pathway
ncar05200
Pathways in cancer
ncar05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124981379
04390 Hippo signaling pathway
124981379
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124981379
09162 Cancer: specific types
05217 Basal cell carcinoma
124981379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124981379
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
124981379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
124981379
NCBI-ProteinID:
XP_047403677
LinkDB
All DBs
Position
3:complement(77999255..78242660)
Genome browser
AA seq
1569 aa
AA seq
DB search
METSAPATAAEKKEVKSGILEGSGFPDPGKKACPLAVAAAVAAQGVPQHLLPPFHAPLPI
DMRHQEGRYHYEPHSVHSVHGPPTLSGSPVISDISLIRLSPHPAGPGESPFNAPHPYVNP
HMEHYLRSVHSSPTLSMISAARGLSPADVAHEHLKERGLFGLPAPGTNPSDYYHQMTLMA
GHPAPYGDLLMQSGSAAGAPHLHDYLNPVDVSRFSSPRVTPRLSRKRALSISPLSDASLD
LQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPAFTFPHPINPVAYQQILSQQR
GLGSAFGHTPPLIQPSPTFLAQQPMALPSISAVSTQLSSGSNCLSDANQNKQSSESAVSS
TVNPITIHKRSKVKTEAEGLRPASPLRLTQEQLADLKEDLDRDDCKQEAEVVIYETNCHW
EDCSKEYDTQEQLVHHINNEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEK
PHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNE
KPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHLRASLLKENGDNEASTE
PGGRGSEDSAEASSSSQAVEDCLHIKAIKTESSGLCQSSPGAQSSCSSEPSPLGSAPNND
SGVEMPGTGPGSLGDLTALDDTPPGADAPALAAPSTGGLQLRKHGTAMHRFEQLKREKLK
SLKDSCSWAGPAPHTRNTKLPPLPASGSSLENFSGPGGGGPTGLLPNPRLSELSASEVTM
LSQLQERRDSSTSTISSAYTVSRRSSGISPYFSSRRSSEASPLGAGRPHNASSADSYDPI
STDASRRSSEASQCSGGGAPGLLNLTPAQQYSLRAKYAAATGGPPPTPLPGLERMSLRTR
LALLDAPERVLPSTCPHPLGPRRGSDGPAYGQGHGHTGAAPAFPHEAPGSGTRRASDPVR
RPDALALPRVQRFHSAHNVNPAPLLPCTERRGLRLQSHPSTDGSLAHTAYSPRPPSISEN
VVMEAMAAGMDGPGPESDLGLPEDDLVLPDDVVQYIKAHAGGALDESTRQVYPTESTSFP
ENPRLPSPGMHGHRRLVAADSNVGPSGPALGGCQLGYGAPSNLNKNNMPVQWNEVSSGTV
DALPGQVKPPHFPQGNLAVVQQKPAFSQYPGYSPQGLQPSPGGLDSTQPHLQPRSGAPSA
PRVNYMQPLRPPATGAQCLSMTTAVSPHTNYGQAHPQLSPSTVSGTLNPFPPSCSNMAAK
PGHLGLPQQMEVASDPSMMGSHHRELGVPNSALTGVPPSHSTQSYPQQSHHLTGPLSQEG
YRQGSSLLPSHQPGFMEPQQGTVGAATSTFGLVQPRPPLEPSPIGRHRGVRAGQQLAYAR
ATSQAMAAMSVSQETAEAVPKGTMGTMVSLPPQPPPQDAGGSQDHSTLHYYGQIHMYEQN
GGLESHGGCPAMRPQPPQPQACPDSIQPQSLPSPGVNQVSSTVDSQLLEAPQIDFDAIMD
DGDHSSLFSGALSPSLLHNLSQNSSRLTTPRNSLTLPSIPTGISNMAVGDMSSMLTSLAE
ENKFLNMMT
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtctgccccagccacggctgccgagaagaaagaagtcaaaagtgggatcctg
gagggcagcggtttccccgaccccggtaaaaaggcctgtcctctggcggtggccgcggct
gtcgctgcccaaggagtgccacagcacctcttgccgccgttccatgcacccttgccgatt
gacatgcgacatcaagagggaaggtaccattacgaacctcactctgtccacagcgtgcac
gggcctcccaccctgagcggcagccctgtcatctctgacatttccttgatccggctttcc
ccacaccctgctggccctggggagtcccccttcaatgcccctcacccctacgtgaacccc
cacatggagcactacctccggtctgtgcacagcagccccaccctctccatgatctctgca
gccaggggcctcagccccgcagatgtagcgcacgagcaccttaaggagaggggactgttc
ggcctccctgccccgggcaccaacccctcagactattaccaccagatgaccctcatggcg
ggccaccctgcaccctacggggacctgctgatgcagagcgggagtgccgccggcgcaccc
cacctgcacgactacctcaatccagtggacgtgtcgcgattctccagcccacgggtgacc
ccccggctgagccgcaagcgggcgctgtccatctccccgctctcagacgccagcctggac
ctgcagcgcatgatccggacctcgcccaactcgctggtggcctacatcaacaactcgcgc
agcagctcggccgccagcggctcctacgggcacctgtcggcaggtgccctcagcccagcc
ttcaccttcccccatcccatcaaccccgtggcctaccagcagatcctgagccagcagcga
ggcctgggctctgcctttgggcacacgccacccctgatccagccctcacctaccttcctg
gcccagcagcccatggccctcccctccatcagtgctgtgtccacccagctgagcagcggc
agcaactgtctgagtgacgccaaccagaacaagcagagcagcgagtcggctgtgagcagc
accgtgaaccccatcaccattcacaagcgtagcaaggtcaagactgaagctgagggcctg
cgaccagcctccccactgagactgacacaggagcagctggctgacctcaaggaagacctg
gacagggatgactgtaagcaggaggccgaggtggtcatctacgagaccaactgtcactgg
gaggactgcagtaaggagtacgacacgcaggagcagctggtgcaccacatcaacaacgag
cacatccacggggagaagaaggagttcgtgtgccgctggcaggcctgcacacgggagcag
aagcccttcaaggctcagtacatgctggtggttcacatgcggaggcacacgggcgagaag
cctcacaagtgcacgttcgaaggctgctcgaaggcctactctcgcctggagaacctgaag
acacacctgcggtcccacaccggggaaaagccctatgtgtgtgagcacgagggctgcaac
aaggccttctccaacgcctcggaccgcgccaagcaccagaaccgcacccactccaacgag
aaaccctacatctgcaaaattccaggctgcactaagagatacactgaccccagctccctc
cggaagcatgtgaagacagtccacggcccagacgctcacgtcaccaagaagcagcgcaac
gatgtgcatctccgtgcctcgttgctcaaggagaatggggacaacgaggccagcactgag
cctggtggccgggggtctgaggacagtgccgaggccagcagcagcagccaggcagtggaa
gactgcctgcacatcaaagccatcaagaccgagagctccgggctgtgtcagtccagcccc
ggggcccagtcatcctgcagcagcgagccctctcccctgggcagtgcccccaacaatgac
agtggcgtggagatgccggggacggggcccgggagcctgggagacctgacagcgctggat
gacacgccccctggggccgacgccccagccctggctgccccctccactggtggcctgcag
ctgcgcaagcacgggaccgccatgcaccggttcgagcagctcaagagggagaagctcaag
tcgctcaaggattcctgctcgtgggctggcccagctccacacacccggaacaccaagctg
cctcccctcccggcaagtggctccagcctggaaaatttcagcggccctgggggcggaggt
cctacagggctgctgcccaacccacggctgtctgagctgtcagcgagtgaggtgaccatg
ctgagccagctgcaggagcgtcgcgacagctccaccagcacaatcagctcggcctacact
gtgagccgccgctcctctggcatctccccctacttctccagccgccgctccagtgaggcc
tcgcccctgggcgccggccgcccacacaacgccagctccgctgactcctacgaccccatc
tccacagacgcctcgcgacgctccagcgaggccagccagtgcagtggtggcggcgccccg
ggactgctcaacctcacgcccgcacagcagtacagcctgcgggccaagtacgcagcggcc
accggcgggccaccgcccacaccacttcccggcctggagcgcatgagcctgaggacccgg
ctggcgctgctggacgcacctgagcgtgtactgccctccacttgtccacacccactgggg
ccccggcgtggcagtgatgggccggcctacggccaaggacatggccacacaggggctgcg
cctgccttcccccacgaggcaccgggcagtggtacgcgacgggccagcgaccccgtgcgg
cggcctgatgccctagctctgccgagggtgcagcgcttccacagcgcccacaacgtgaac
ccggccccactactgccttgcacagaaaggcgaggcctgcgcctgcagagccacccaagc
accgacggcagcttggcccatactgcttactctcccaggccacctagcatcagcgagaac
gtggtaatggaggccatggccgcagggatggacggcccagggccggagtccgacctggga
ctgccggaggacgacctggtgctgccggatgacgtggtacagtacatcaaggcacacgcg
ggtggggccctggatgagagcaccaggcaggtatatcccacagaaagcaccagcttccct
gagaaccccagactgcccagcccggggatgcacggccatcgcagactggtggctgcagac
tccaatgtgggcccctctggccctgcgctgggaggctgccagctgggctatggggcaccc
tccaacctgaacaaaaataacatgcctgttcaatggaacgaggtgagctctggcaccgtg
gacgccctgcccggccaggtgaaacctccgcactttcctcagggcaacctggctgtggtg
caacagaagccagccttcagccagtacccaggctacagtccacaaggcctacagcccagt
cctgggggcctggacagcacccagccacacctccagccccgtagtggagccccctctgca
cccagagtaaactatatgcaaccgctgcgaccgccagccacaggcgctcagtgtctgagc
atgaccactgcagtgagcccccacaccaactatggccaagcccacccccagctgagcccc
agcacagtcagtgggaccctgaacccgttccccccatcctgcagcaacatggcagccaag
ccaggccacctggggcttcctcagcaaatggaagttgcctctgacccctccatgatgggc
agccaccacagggaacttggggtccccaattcagcactgactggggtaccaccatctcac
tcaacccagagctatccacagcagagccaccacctgacaggccccctgagtcaggagggc
taccgccagggctccagcctgctgccttcccaccagcctggcttcatggagccccagcag
ggcacagtgggggcggctacatcaacctttggcctagtacaaccccggccacccctcgag
cccagccccatcggccgccaccgtggggtacgtgctgggcagcagttggcttatgccagg
gccactagccaggccatggctgccatgtcagtcagtcaggagacagcagaggctgtgccc
aagggaacaatgggcaccatggtgtcactgcctcctcagccacctccacaggatgcaggc
ggatctcaggaccacagcacgctccactactatggccagatccacatgtatgaacagaat
ggaggcctggagagccacggaggctgcccagccatgcggccccagccgccacagccacag
gcctgcccggacagcatccagccccagtctttgccctcaccaggagtcaaccaggtgtcc
agcacggtggactcccagctcctagaggccccccagatcgacttcgatgccatcatggat
gacggcgatcactcaagcttgttctcgggtgcactgagccccagtctcctccacaacctc
tcccagaactcctcccgcctcaccaccccccggaactccctgaccctgccctccatcccc
acgggcatcagcaacatggctgttggggacatgagctccatgctcaccagcctggctgag
gagaacaaattcctgaacatgatgacctaa
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integrated database retrieval system