Sciurus carolinensis (gray squirrel): 124982488
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Entry
124982488 CDS
T08117
Name
(RefSeq) beta-1,4-galactosyltransferase 3
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00510
N-Glycan biosynthesis
ncar00513
Various types of N-glycan biosynthesis
ncar00514
Other types of O-glycan biosynthesis
ncar00515
Mannose type O-glycan biosynthesis
ncar00533
Glycosaminoglycan biosynthesis - keratan sulfate
ncar00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ncar01100
Metabolic pathways
Module
ncar_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ncar_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
124982488
00513 Various types of N-glycan biosynthesis
124982488
00515 Mannose type O-glycan biosynthesis
124982488
00514 Other types of O-glycan biosynthesis
124982488
00533 Glycosaminoglycan biosynthesis - keratan sulfate
124982488
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
124982488
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124982488
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
124982488
2.4.1.90 N-acetyllactosamine synthase
124982488
Glycosyltransferases [BR:
ncar01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
124982488
Glycolipid
124982488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
124982488
NCBI-ProteinID:
XP_047405182
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All DBs
Position
1:88893808..88899491
Genome browser
AA seq
395 aa
AA seq
DB search
MLRRLLERPCTLALLVGSQLAVMMYLSLGGFRSLSALFGRDQGPTFDYSHPRDVYSNLSH
LPGAPVAPGGPSAPQGLPYCPERSPLLVGPVLVSFSPVPSLAEIVERNPRVEPGGRYRPA
GCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQLAYGIYVIHQAGNGTFNRAKLLNV
GVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYSLPYPQYFGGV
SALTPDQYLKMNGFPNEYWGWGGEDDDIATRVRLAGMKISRPPTSVGHYKMVKHRGDKGN
EENPHRFDLLVRTQNSWTQDGMNSLTYRLLARELGPLYTNVTADIGTDPRGPRAPGPRYP
PGSSQAFRQEMLQRRPPARPGPLPTANHTARHSPH
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggaggctgctggagcggccctgcacgctggccctgcttgtgggttcccagctg
gccgttatgatgtacttgtcactagggggcttccgaagccttagtgccctatttggccgg
gaccaggggcctacatttgactattctcaccctcgagatgtctacagtaacctcagtcat
ctgcctggggctcctgtagctccaggaggtccttcagctcctcaaggcctaccctactgt
cctgaacgatctcctctcttagtgggtcccgtgttggtgtcctttagcccagtgccatca
ctagcagagattgtggaacggaatcctagggtagagcctgggggtaggtatcgcccagca
gggtgtgagccccgctcccggacagccatcatcgtgccgcatcgtgcccgggagcatcac
ctacgcctgctgctttaccacctgcaccccttcctgcagcgccagcagcttgcttatggc
atctatgtcatccaccaggctggaaatggaacatttaacagggcaaaattgctgaatgtt
ggagtgcgggaggcactgcgtgatgaagagtgggactgcctgttcttgcatgatgtggac
ctcttgccagaaaatgaccacaatctctatgtgtgtgacccccggggaccccgccatgtt
gctgttgccatgaacaagtttggatacagcctcccgtacccccagtacttcggaggagtc
tcagcgctcactcctgaccagtacctgaagatgaatggcttccctaacgaatactggggc
tggggtggtgaggatgacgacatagctaccagggtacgcctggctgggatgaagatctct
cggccccccacatctgtgggacactataagatggtaaagcaccgaggagataagggcaat
gaagaaaatccccacagatttgacctcctggtccgtactcagaactcctggactcaagat
gggatgaactctctgacataccgattgctggctcgagaactgggtcctctctataccaac
gtcacagcagacattgggactgaccctcggggtccccgggctcctggtccccgttatcca
cccggttcttcccaggccttccgtcaagagatgctgcagcgccggccccctgctaggcct
ggccctctgcctactgccaaccacacagcccgccatagtccacactga
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