KEGG   Sciurus carolinensis (gray squirrel): 124983352
Entry
124983352         CDS       T08117                                 
Name
(RefSeq) interferon gamma-like
  KO
K04687  interferon gamma
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03050  Proteasome
ncar04060  Cytokine-cytokine receptor interaction
ncar04066  HIF-1 signaling pathway
ncar04217  Necroptosis
ncar04350  TGF-beta signaling pathway
ncar04380  Osteoclast differentiation
ncar04612  Antigen processing and presentation
ncar04630  JAK-STAT signaling pathway
ncar04650  Natural killer cell mediated cytotoxicity
ncar04657  IL-17 signaling pathway
ncar04658  Th1 and Th2 cell differentiation
ncar04659  Th17 cell differentiation
ncar04660  T cell receptor signaling pathway
ncar04940  Type I diabetes mellitus
ncar05140  Leishmaniasis
ncar05142  Chagas disease
ncar05143  African trypanosomiasis
ncar05144  Malaria
ncar05145  Toxoplasmosis
ncar05146  Amoebiasis
ncar05152  Tuberculosis
ncar05160  Hepatitis C
ncar05164  Influenza A
ncar05168  Herpes simplex virus 1 infection
ncar05200  Pathways in cancer
ncar05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
ncar05321  Inflammatory bowel disease
ncar05322  Systemic lupus erythematosus
ncar05323  Rheumatoid arthritis
ncar05330  Allograft rejection
ncar05332  Graft-versus-host disease
ncar05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    124983352
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    124983352
   04630 JAK-STAT signaling pathway
    124983352
   04066 HIF-1 signaling pathway
    124983352
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124983352
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    124983352
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    124983352
   04612 Antigen processing and presentation
    124983352
   04660 T cell receptor signaling pathway
    124983352
   04658 Th1 and Th2 cell differentiation
    124983352
   04659 Th17 cell differentiation
    124983352
   04657 IL-17 signaling pathway
    124983352
  09158 Development and regeneration
   04380 Osteoclast differentiation
    124983352
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124983352
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    124983352
  09172 Infectious disease: viral
   05160 Hepatitis C
    124983352
   05164 Influenza A
    124983352
   05168 Herpes simplex virus 1 infection
    124983352
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    124983352
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    124983352
   05144 Malaria
    124983352
   05145 Toxoplasmosis
    124983352
   05140 Leishmaniasis
    124983352
   05142 Chagas disease
    124983352
   05143 African trypanosomiasis
    124983352
  09163 Immune disease
   05322 Systemic lupus erythematosus
    124983352
   05323 Rheumatoid arthritis
    124983352
   05321 Inflammatory bowel disease
    124983352
   05330 Allograft rejection
    124983352
   05332 Graft-versus-host disease
    124983352
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    124983352
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    124983352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ncar03051]
    124983352
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ncar04052]
    124983352
   00536 Glycosaminoglycan binding proteins [BR:ncar00536]
    124983352
Proteasome [BR:ncar03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    124983352
Cytokines and neuropeptides [BR:ncar04052]
 Cytokines
  Interferons
   124983352
Glycosaminoglycan binding proteins [BR:ncar00536]
 Heparan sulfate / Heparin
  Cytokines
   124983352
SSDB
Motif
Pfam: IFN-gamma API5 DUF7774 TssR_C T26-6p_Ig-like_dom
Other DBs
NCBI-GeneID: 124983352
NCBI-ProteinID: XP_047406527
LinkDB
Position
4:complement(127292479..127297097)
AA seq 166 aa
MKYTSYFLAFQLCIILGSSSCYSQASINKEIENLKEYFNASTSDVGDGEPLFLDIMNNWK
EESDQKVIQSQIVSFYFKLFEHLKNNKIIQKSMDTIKEDLIVKFFNSSVSKLEDFLKVSQ
IQVNDLQVQRKAISELFKVMSDLSPRSTLRKRKRSQSSILGRRASK
NT seq 501 nt   +upstreamnt  +downstreamnt
atgaaatacacaagttatttcttggcctttcagctctgcatcattttgggatcttccagc
tgttactcccaagcctcaattaataaagaaatagaaaatttaaaagaatattttaatgca
agtacttcagatgtgggagatggggagcctcttttcttggatattatgaataactggaag
gaagagagtgaccaaaaagtaattcagagccaaattgtctctttctacttcaaactcttt
gaacacttaaaaaacaacaagatcatccaaaagagcatggacaccatcaaggaggacctg
attgttaagttcttcaatagcagtgtcagcaaactggaggacttcttaaaggtgtctcaa
attcaggtaaatgacctgcaggtccagcgcaaagcaatcagtgagctcttcaaagtgatg
agtgatctgtcaccaagatctaccctaaggaagcgaaaaaggagtcagtcttcgattctg
ggtcggagagcatccaaataa

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