Sciurus carolinensis (gray squirrel): 124983376
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Entry
124983376 CDS
T08117
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00600
Sphingolipid metabolism
ncar00604
Glycosphingolipid biosynthesis - ganglio series
ncar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124983376
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
124983376
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124983376
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
124983376
Glycosyltransferases [BR:
ncar01003
]
Glycan extension
Glycolipid
124983376
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_transf_64
Motif
Other DBs
NCBI-GeneID:
124983376
NCBI-ProteinID:
XP_047406565
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Position
4:complement(117717802..117724809)
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AA seq
533 aa
AA seq
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MRLGRRALCALVLLLACASLGLLYASTREAPGLRTPLALWAPPQGPPRPELPDLVPEPRY
AHIPVRIKEQVVGLLAQNNCSCESSGGSFPLPFQRQVRAIDLTKAFDPEELRTASAEREK
EFQAFLSRSQSPADQLLIAPANSPLQYPLQGVEVQPLRSILVPGLSLQAASGQEVYQVNL
TASLGTWDVAGQVTGVTLTGEGQPDLTLASPGLDHLNRQLQLVTYSSRSYQTNTADTVRF
STKGHEAAFTIRIRHPPNPRLYPPGSLPQGAQYNISALVTIATKTFLRYDRLRALIASIR
RFYPTVTVVIADDSDKPERVSGPHVEHYLMPFGKGWFAGRNLAVSQVTTKYVLWVDDDFV
FTARTRLERLVDVLERTPLDLVGGAVREISGFATTYRQLLSVEQGAPGLGNCLRQRRGFH
HELVGFPGCVVTDGVVNFFLARTDKVREVGFDPRLSRVAHLEFFLDGLGSLRVGSCSDVV
VDHASKLKLPWASRDAGAETYAQFRYPGSLDESQVAKHRLLFFKHRLQCMTAE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgggccgccgggccctctgcgcgctggtcctgctgctcgcctgcgcctcgcta
ggtctcctgtacgcgagcacccgagaggcgccaggcctccgcacccctcttgctctgtgg
gcgcccccgcagggcccccccaggcccgagctgccagaccttgtccctgagccccgctac
gcacacatcccagtaaggatcaaggaacaagtggtggggttgttggctcagaacaactgc
agttgtgagtccagtggagggagtttcccccttcccttccagagacaggtcagagccatt
gatctcaccaaggcctttgaccctgaggaactgaggactgcctctgctgagagggaaaaa
gagttccaggccttcctttcaagaagccagtccccagctgaccagctgctcatagcccct
gccaactcccctctacagtatcctctgcagggcgtggaggttcagcccctcaggagcatc
ttggtgccagggttgagcctgcaggcagcttctggtcaggaggtataccaggtgaacctg
actgcttccctgggcacctgggatgtggcagggcaagtgactggagtgactctcactgga
gaggggcagccagatctcacccttgccagcccagggctagaccacctcaaccggcagcta
caactggtcacttacagtagccgaagctaccagaccaacacagcagacacagtccggttc
tccaccaaaggacatgaggctgccttcaccatccgcataagacatccccccaatccccgg
ctgtacccgcccgggtctctacctcagggagcccagtacaacatcagcgctctggtcacc
attgccaccaagaccttccttcgttatgataggctgcgagcactcatcgctagcatccgc
cgcttctaccccaccgtcaccgtggtcattgctgacgacagcgacaaaccagagcgcgtt
agcggtccccacgtggagcactatcttatgccctttggcaagggctggttcgcaggccgg
aacctggccgtgtcccaagtaaccaccaaatatgtgctgtgggtggacgacgactttgtc
ttcacagcgcgcacgcggctggagaggcttgtggatgtgctggaacggacgccgctggac
ctggttgggggcgcagtgcgggagatctcgggttttgctactacctaccggcagctgctg
agcgtggagcagggcgccccaggcctcgggaactgcctccggcaacggcgtggcttccac
cacgagcttgttggcttcccaggctgcgtggtcaccgatggcgtcgttaacttctttcta
gcgcgcaccgataaggtgcgagaagtcggcttcgacccgcgcctgagccgcgtagcacat
ctggaattcttcttggatgggcttggttcccttcgggttggctcctgctctgacgtcgtt
gtggatcatgcatcgaagttgaagctgccatgggcttcaagggatgctggggcagagact
tatgcccagttccgttacccaggatcactggatgaaagtcaggtggccaaacatcgcctt
ctcttcttcaaacaccggctgcagtgcatgactgcggagtga
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