Sciurus carolinensis (gray squirrel): 124985504
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Entry
124985504 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: 2-oxoglutarate dehydrogenase-like, mitochondrial
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00020
Citrate cycle (TCA cycle)
ncar00785
Lipoic acid metabolism
ncar01100
Metabolic pathways
ncar01200
Carbon metabolism
ncar01210
2-Oxocarboxylic acid metabolism
Module
ncar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ncar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
124985504
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
124985504
Enzymes [BR:
ncar01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
124985504
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
GGA_N-GAT
Motif
Other DBs
NCBI-GeneID:
124985504
NCBI-ProteinID:
XP_047410206
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All DBs
Position
5:complement(102081934..102108684)
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AA seq
1068 aa
AA seq
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MSQLRLVPSLLGAQVTRFLAARDISVFNWRGRSSGSPATFPGSRGGGGSSYMEEMYFAWL
ENPQSVHKSWDSFFRKASEEASSAQPQLPSVIPESRPTVCSRTKTSKLVEDHLAVQSLIR
AYQIRGHHVAQLDPLGILDADLDSFVPSDLITTIDKLAFYDLREADLDKEFQLPTTTFIG
GSENTLSLREIIRRLESTYCQHIGLEFMFINDVEQCQWIRQKFETPGVMQFSSEEKRTLL
ARLVRSMRFEDFLARKWSSEKRFGLEGCEVMIPALKTIIDKSSEMGIENVILGMPHRGRL
NVLANVIRKDLEQIFCQFDPKLEAADEGSGDVKYHLGMYHERINRVTNRNITLSLVANPS
HLEAVDPVVQGKTKAEQFYRGDAQGKKVMSILVHGDAAFAGQGVVYETFHLSDLPSYTTN
GTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVIYVCSVAAEWRN
TFNKDVVVDLVCYRRRGHNEMDEPMFTQPLMYKQIHRQVPVLKKYADKLIAEGTVTLQEF
EEEIAKYDRICEEAYGRSKDKKILHIKHWLDSPWPGFFNMDGEPKSMTCPTTGIPEDVLT
HIGNVASSVPLEDFKIHTGLSRILRGRADMIKKRTVDWALAEYMAFGSLLKEGIHVRLSG
QDVERGTFSHRHHVLHDQEVDRRTCVPMNHLWPDQAPYTVCNSSLSEYGVLGFELGYAMA
SPNALVLWEAQFGDFHNTAQCIIDQFISTGQAKWVRHNGIVLLLPHGMEGMGPEHSSARP
ERFLQMSNDDSDAYPVFTEDFEVSQLYDCNWIVVNCSTPASYFHVLRRQILLPXRKPLII
FTPKSLLRHPEARSSFDQMVSGTSFQRVIPEDGAAAQAPEQVRRLIFCTGKVYYDLVKER
SSQGLEEQVAITRLEQISPFPFDLIKQEAERYPGAELVWCQEEHKNMGYYDYISPRFMTI
LGRTRPIWYVGRDPAAAPATGNRNAHLVSLKKFLDTAFKSPGLRGQDISRVRQGLPGSCC
GISWGLRGPERGKGYLVPQDQPSLCSNRGQRVGFGTIPTLLSCSFQNL
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagctaaggctggtgccatccctgctcggggcacaggttacaagattcctggct
gcgcgggacatctcagtgttcaactggcgtggcaggtcttctgggtctccagctaccttc
cctggaagcagaggtggaggtggctccagttacatggaagagatgtacttcgcctggttg
gaaaacccacagagtgttcacaagtcttgggacagcttcttccggaaagccagtgaagaa
gcctcatctgctcagccacagctcccatctgtcatccccgagagcaggcccacagtctgc
agccggaccaagaccagcaaactggtagaggaccatctggctgtgcagtccctgatccgg
gcctaccagatccggggccatcatgtggcccagctggatcccctgggcattctggatgca
gacctggactcatttgtgccctctgacttgatcacaaccattgataagttggccttttat
gacctgcgggaggctgacttggataaagagttccagcttcccacaaccaccttcattggg
ggctctgaaaacaccctgtctttgcgggagatcatccggcgcctggagagtacctactgc
cagcacattggcctggagtttatgttcattaatgatgtggaacagtgccagtggattcgg
cagaaatttgagacccccggtgtgatgcagttctccagtgaggagaagcgaaccctactg
gcccggcttgtgcgctccatgaggtttgaagatttcctggcccggaagtggtcttcagag
aagcggtttggcctggaaggctgtgaggtcatgatccctgccctcaagactatcattgac
aaatccagtgagatggggattgagaatgtcatcctggggatgccacacaggggcaggttg
aatgtgttggccaatgtgattcgcaaggacctggagcagatcttttgccagtttgacccc
aagctggaggcagcagatgagggttctggagatgtcaaataccatctgggcatgtaccat
gagaggatcaaccgcgtcaccaacaggaacatcacattgtcactggtggccaacccctcc
catctggaagccgtggaccctgtggtacaggggaagaccaaggcagaacaattctaccgt
ggggatgcccagggcaagaaggtcatgtccatccttgtccatggggatgctgcctttgct
ggacagggtgtggtctatgagaccttccacctgagcgacctgccttcttataccaccaat
ggcaccgtacacgttgttgtcaacaaccagattggctttaccacggacccccgaatggcc
cgctcctcaccgtaccccactgatgtggcccgagtggtcaatgctcccatcttccatgtg
aatgcagatgatccagaggctgtgatatatgtgtgcagtgtggcagcagagtggaggaac
actttcaacaaagatgtcgttgtggacctggtttgttaccgccggcgtggccacaatgag
atggatgagcccatgttcacacagccactcatgtataagcagatacacagacaggtgccg
gtgctgaagaagtatgcagataagctcatcgccgagggaacggtcaccctgcaggaattt
gaggaagaaattgccaaatatgaccgcatttgtgaggaggcatatggaaggtctaaggat
aaaaagatccttcatatcaagcactggctggactccccctggcctggcttcttcaacatg
gatggggagcccaagagcatgacgtgtcctaccacaggcatccctgaggacgtgctgacc
catattggcaatgtggccagctctgtgcccttggaggactttaagatccacacaggcctc
tctcgcatcctgcgtggccgtgcagacatgatcaagaagcggacagtggactgggcattg
gctgagtacatggcctttggctccctgctgaaagagggcatccacgtgcggctcagtggg
caggatgtggagaggggcacattcagtcaccggcaccatgttctccacgaccaggaagtt
gaccggaggacgtgtgtccctatgaaccatctgtggcctgaccaggccccctacaccgtg
tgcaacagctctctctcggaatatggagttcttggttttgagctgggctatgccatggcc
agccccaatgccctggttctctgggaggctcagtttggtgacttccacaacacagcccag
tgtatcatcgaccagttcatcagcactggccaggccaagtgggtgcggcataacggcatt
gtgctgcttctgccccatggcatggagggcatgggccctgagcactcctcagcaagaccc
gagaggttcctgcagatgagtaatgatgactctgatgcctacccagtattcactgaggac
tttgaggtgagccagctctacgactgcaactggattgtggtgaactgctccacacctgcc
agctatttccatgtgctgcgccggcagatcctactgcccntccgcaagccactgatcatc
ttcacgcccaaatctctgctgaggcatccggaggccaggtcaagctttgatcagatggtg
tccgggaccagcttccagcgagtaattcctgaagatggggctgcagcacaggctcctgaa
caggtgcggcggctcatcttctgcacgggaaaggtatactatgacctggtgaaggaacgc
agcagccagggcctggaggagcaggtggccatcacacgcctagaacagatatctccattc
ccttttgacctgatcaagcaggaggcagagaggtacccaggagcggagttggtgtggtgt
caggaggaacacaagaatatgggctactatgactacatcagcccacgcttcatgaccatc
cttggccgcactcgccccatatggtatgtgggccgtgacccagcagctgcaccagccact
ggaaacaggaacgcacacctggtgtcattgaagaagtttctggatactgccttcaaatct
ccaggccttcgagggcaagacatttctagagttaggcaaggactgcctgggtcttgctgt
gggatcagttggggacttagggggcctgagaggggtaagggctacttggtaccccaggac
caaccatccttatgtagcaatcgaggccaaagagtaggctttggtactataccaactttg
ctttcatgttcatttcagaatctgtaa
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