Sciurus carolinensis (gray squirrel): 124985904
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Entry
124985904 CDS
T08117
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04014
Ras signaling pathway
ncar04015
Rap1 signaling pathway
ncar04020
Calcium signaling pathway
ncar04066
HIF-1 signaling pathway
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar05202
Transcriptional misregulation in cancer
ncar05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124985904
04014 Ras signaling pathway
124985904
04015 Rap1 signaling pathway
124985904
04066 HIF-1 signaling pathway
124985904
04020 Calcium signaling pathway
124985904
04151 PI3K-Akt signaling pathway
124985904
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124985904
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124985904
09163 Immune disease
05323 Rheumatoid arthritis
124985904
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncar01001
]
124985904
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124985904
Protein kinases [BR:
ncar01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
124985904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
Ig_VEGFR-1-like_5th
VEGFR-2_TMD
VEGFR1-3_N_Ig-like
Ig_4
C1-set
Ig_5
Ig_C17orf99
Haspin_kinase
CATSPERE_NTD1
Motif
Other DBs
NCBI-GeneID:
124985904
NCBI-ProteinID:
XP_047410488
LinkDB
All DBs
Position
5:complement(25079901..25248458)
Genome browser
AA seq
1333 aa
AA seq
DB search
MVSCWDTGVLLCALLGCLLLTGSSSGSKLKGPELSLKGTQHIMQAGQTLYLKCRGDSAHS
WSLPKTVSKESKRLSITKSACGRNGKQFCSTLTLNMAQANHTGFYSCKYLPIHTSKKKKA
ESTIYIFISDIGRPFIEMYSEIPAIVYMTEGKQLIIPCRVTSPNITVTLKKFPFDTLIPD
GKRITWDSRKGFIISNATYREIGLLTCEATVNGHLYKTNYLTHRQTNTITDVQISTPSPV
KLLSGHTLTLNCTATTALNTRVQMTWSYPGKTTKRASVRQRIDQSNSHANVFYSVLIIHK
VQNKDKGLYTCHVKSGPSFKSVNTSVHIFEKAFITVKHRKQQVHETIAGKRSYRLSMKVK
AFPSPEVVWLKDGSPATEISARYLVHGYSLIIKDVTAEDAGDYTILLGIRQSNVFKNLTA
TLIVNVKPQIYEKAVSSFPDPTLYPLGSRQILTCTAYGIPQPVITWSWSPCNHNHSKARY
DFCSNTEESFILDPDSNTGNRIESITQRTAVIEGKNKTASTLVVADSRISGIYSCMASNK
IGTVERNISFYITDVPNGFHVNLEKMPTEGEDLKLSCTVNKFLYRDITWILLRTVNNRTM
HHSISKQKMAITKEYSITLNLIIKNVSLEDSGTYACRARNIYTGEEILQKTEVIIRDQEA
PHLLRNLSDHTVAISSSTTLDCQAHGVPEPQITWFKNNHKIQQEPGIILGPGNSTLFIER
VTEEDEGVYQCKATNQKGATESSAYLTVQGTSDKSNLELITLTCTCVAATLFWLLLTLFI
RKLKRSSSQIKTDYLSIIMDPDEVPLDEQCERLPYDASKWEFARERLKLGKSLGRGAFGK
VVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTK
QGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGMEQDKKPRLDSV
TSSESFASSGFQEDKSLSDDEEEEDSDDFYKQPITMEDLISYSFQVARGMEFLSSRKCIH
RDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKS
DVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLKEGMRMRAPEYATPEIYQIMLDCWHKD
PKERPRFVELVEKLGDLLQANVQQDGKDYIPLNAILTGNSGFTYSTPAFSEDFFKDSISA
PKFNSGSSDDVRYVNAFKFMSLERIKTFEELSPNATSMFDDYPLDSSMLLTSPLLKRFTW
TDSKPKASLKIDLRVTSKSKESGLSDITRPGFCLSSCGHIRSAHDNSELGKEDSCCSPPP
DYNSVVLYSTPPA
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggtcagctgctgggacaccggggtcctgctgtgcgcgctgctcggctgtctgcttctc
acagggtctagttcaggttcaaaattgaaaggtcctgaactgagtttaaaaggcacccag
cacatcatgcaagcaggccagacactgtatctcaaatgcaggggggactcagcccactca
tggtctttgcctaaaacggtgagtaaggaaagcaaaagactgagcataactaaatctgcc
tgtggaaggaatggcaaacaattctgcagtactttgaccttgaacatggctcaagcaaac
cacactggcttctatagctgcaaatatctacccatacatacttcaaagaagaagaaagca
gaatctacaatctatatatttattagtgatataggtagacctttcatagagatgtacagt
gaaatacctgcaattgtatatatgacagaaggaaagcagctcatcattccctgccgggtt
acatcacctaacatcactgttactctaaaaaagtttccatttgatactctgatccctgat
ggaaaaagaataacttgggacagtaggaagggctttataatatcaaatgcaacatacaga
gaaatagggcttctgacctgtgaagcaacagtcaatggacatttgtataaaacaaactat
ctcacacatcggcaaaccaatacaatcacagatgttcaaataagcacaccaagtccagtg
aaattacttagtggtcacaccctcaccctcaactgtactgccaccactgcattgaacaca
agagttcaaatgacctggagttaccctggtaaaacaactaagagagcttctgtaaggcaa
cgaattgaccaaagcaattcccatgccaatgtgttctacagtgttcttattattcacaaa
gtacagaacaaagacaaaggactttatacttgtcacgtgaagagtggaccatcattcaaa
tctgttaacacctcagtgcatatatttgaaaaagcattcatcactgtgaaacatcggaaa
caacaggtgcatgaaaccatagcaggcaagcggtcctacaggctctccatgaaagtgaag
gcatttccctcaccagaagttgtatggctaaaagatgggtcacctgcaacggagatatct
gctcgctatttggttcatggttattctttaattatcaaagacgtaactgcagaggatgca
ggggattatacaatcttgctgggcataaggcagtcaaatgtgtttaaaaacctcactgcc
actctaattgtaaatgtgaaaccccagatttacgaaaaggcagtgtcgtcatttccagac
ccaactctctacccactgggcagcagacaaatcctgacttgtaccgcctatggaatccct
caacccgtaatcacttggtcctggagcccctgtaaccataatcattccaaagcaaggtat
gacttttgttccaatactgaagagtcctttatcctggatcctgacagcaacacaggaaac
agaattgagagcatcactcagcgtacagcagtaatagaaggaaagaataagacggctagc
accttagttgtggctgactccagaatttctggaatctacagttgcatggcttccaataaa
atagggactgtggaaagaaacataagcttttatatcacagatgtgccaaatgggtttcat
gttaacttggaaaaaatgcctacagaaggagaggacctgaaactgtcttgcacagttaac
aaattcttgtacagagacattacttggattttgttacggacagttaataacagaacaatg
catcacagtatcagcaagcaaaaaatggccatcactaaagagtactctattactcttaac
ctcatcatcaagaatgtatctctggaagattcgggcacctatgcctgcagagccaggaac
atatacacaggggaagaaatccttcagaagacagaagttataattagagatcaggaagcg
ccacacctcctgcgaaacctcagtgatcacacagtagccatcagcagctctaccacttta
gactgtcaagctcatggtgtccccgagcctcagatcacttggtttaaaaacaaccacaaa
atacaacaagaacctggaattattttaggaccaggaaacagcacactgtttattgaaaga
gtcacagaggaggatgaaggtgtctatcagtgcaaagctaccaaccagaagggtgccacg
gaaagctcggcatacctcaccgtgcaaggaacctcagacaagtctaatctggagctgatc
actttgacttgtacctgtgtggctgcaaccctcttctggctcttgttaactctctttatc
cgaaagctgaaaaggtcatcttcccaaataaaaactgactatctatcaattataatggac
ccagatgaagttcccctggatgagcagtgtgagcggctcccctacgatgccagcaagtgg
gagtttgcccgcgagagacttaaattgggcaaatcacttggaagaggggcttttgggaaa
gtggttcaagcatctgcatttggcataaagaaatcacccacctgccggactgtggctgtg
aagatgctgaaagagggggccacagccagtgagtacaaagctctgatgactgagctcaag
atcttgacccacattggccaccacctgaacgtggttaacctgctgggagcctgcaccaaa
caaggagggcctctgatggttattgttgaatactgcaaatatggaaatttatccaactac
ctcaagagtaaacgagacttattctttctcaacaaggatgcagcattgcacatggagcct
aagaaagaaaaaatggaaccaggcatggaacaggacaagaaacccagactagatagtgtc
accagcagtgagagcttcgcaagctctgggtttcaggaagataaaagtctgagtgatgac
gaggaagaggaggattctgatgatttctacaagcagcccatcactatggaggatctgatt
tcttacagttttcaagtggccagaggcatggagtttttgtcttccaggaagtgtattcat
cgagacttggctgcacgaaacattcttttatctgagaacaacgtggtgaagatttgtgat
tttggccttgcccgggatatttataagaatcccgattatgtgagaaaaggagatactcga
cttcctctgaaatggatggctcctgaatccatctttgacaaaatctacagcaccaagagt
gatgtgtggtcttatggagtgttgctgtgggaaatcttttctctaggtgggtctccatac
ccaggagtacaaatggatgaggacttctgcagtcgtctgaaagagggcatgaggatgagg
gcccctgagtacgcaactcctgaaatctaccagatcatgttggattgctggcacaaagac
ccaaaagaaaggccacgatttgtagaacttgtagaaaaactgggtgatttgcttcaagcc
aatgtgcaacaggatggtaaagattatatcccactcaatgccatactgacaggaaacagt
ggctttacctactcaactccggccttctctgaggactttttcaaggacagtatttcagcc
ccgaagtttaattcaggaagctctgatgatgtcagatatgtaaatgctttcaaattcatg
agtctggaaagaatcaaaacctttgaagaactttcaccaaatgccacctccatgtttgat
gattatccgttggacagtagcatgctgctgacctcccctttgctgaaacgcttcacctgg
actgacagcaaacccaaggcctcactaaagattgacttgagagtaaccagtaaaagtaag
gagtcagggctttccgacatcaccaggcctggcttctgcctgtccagctgtggacacatt
agatctgcgcatgacaactcagagctgggaaaggaggattcatgctgctctccaccccca
gactacaactcagtggtgttgtactccaccccacctgcctaa
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