Sciurus carolinensis (gray squirrel): 124986722
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Entry
124986722 CDS
T08117
Name
(RefSeq) protocadherin gamma-C5 isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124986722
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Protocadherins
124986722
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
PepSY
Motif
Other DBs
NCBI-GeneID:
124986722
NCBI-ProteinID:
XP_047411301
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Position
6:99741343..99913274
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AA seq
944 aa
AA seq
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MGSKTSPQLSGKWQVLCMLSLCCWGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKVTDLL
SRRLRLGSEENGRYFSLSLMSGALAVNQKIDRENLCGASTSCLLPVQVVTEHPLELIRVE
VEILDLNDNSPSFATPEREMRISESAAPGARFPLDSAQDPDVGTNTVSFYTLSPSSHFSL
NVKTLKDGKLFPELVLEQQLDRETQARHQLVLTAVDGGTPPHSGTSLISIIVLDINDNAP
TFQSSVLRVGLPENAPMGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVRNLFGLDPNSG
AIHVLGSVDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASLVNPVP
ESIPMGTVVGLFNVRDRDSGRNGEVSLDISPDLPFQIKPSENHYSLLTSQPLDREATSHY
IIDLLASDAGSPPLHTRLTIRINISDVNDNAPQFTQQLYTAYIPENRPPGSLLCTVAASD
PDTGDNARLTYSIVGSQIQGAPSSSYVYVNPDDGRVFAQRTFDYELLQMLQIVVGVRDSG
SPSLHANTSLHVFVLDQNDNAPAVLHPRPGREFSAPQRLPRSAPPGSLVTKVTAVDADAG
HNAWLSYSLLPQSTAPGLFLVSAHTGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTA
TVLLVLEDEDPEEMPKSSDFFTHPPERSDLTLYLIVALAAISLLSLVTFTFMSAKCLRGQ
ADGDGGGGRCCRHQDSPSREFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSP
ASDGSDFTFLRPLSVQQPSALALEPDAFRSHCNTLRDRSQQAPPNTDWRFSQAQRPGTSG
SQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHV
PDYRQNVYIPGSNATLTNAPGKRDGKAPAGGNGNKKKSGKKEKK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggtccaagacatccccacagctctctgggaaatggcaagtgctgtgcatgttgtcc
ttgtgctgctggggctgggtgtctgggcagcttcgttactcagtggtggaagagtctgag
ccggggacgctggtagggaatgttgctcaagatctgggcttaaaggtgacagatctgttg
agccgccgattgcggctgggctctgaagagaatgggcgctatttttccctgagcttgatg
agtggtgctctagcagtgaatcaaaagattgaccgagagaacctgtgtggagccagcacc
agctgcctgctgccagtgcaggtggtgactgaacaccctctggagctcatccgtgtagag
gtagagatcctggatctcaatgataactctccaagctttgccactcctgagcgagagatg
cgtatctcagaatcagcagcacctggagcacgattcccactggatagtgcccaggatccg
gatgtgggcaccaatactgtgagcttctacactctaagccccagcagccacttttctcta
aatgtgaagacccttaaagatgggaagctcttcccagagctggtgctagagcagcagctg
gatcgtgaaactcaggcaagacatcagctggtgctcactgctgtggatgggggtacccca
ccccactcagggaccagcctcatctccatcattgtgctggacatcaatgataatgctcca
acctttcagtcctcagttctacgagtgggacttccagagaatgcacccatggggaccctg
ctgctccgcctcaatgccactgatccagatgagggcaccaatggccaactagactattct
tttggagatcatacttcagaggcagtgcggaatctctttggcctggaccctaatagtgga
gccatccatgtgttggggtcagtagattttgaagagtcaagtttctatgaaattcatgca
agagcccgtgaccagggacagccagccatggaaggccactgtgtgattcaagtggatgtg
ggggatgccaatgacaatgcccctgaggtactattggcctctttggtcaaccctgtccca
gagagcatacccatgggcacagtagtggggttgtttaatgtgcgggatcgagactcagga
agaaatggtgaagtaagtctggatatctctccagacctcccatttcagattaagccttct
gagaaccactactcattgctaaccagtcagcccttggaccgtgaggccacatcccattat
atcattgatctgctggccagtgatgctggctcacctcctctgcacacacgtctcaccatc
aggatcaacatttcagatgttaatgacaacgcaccccagttcacccagcagctctatact
gcttacatcccagaaaacaggcccccgggctcccttctctgcactgtggctgcctcagat
ccagacactggggataatgcccgtctcacctactccattgtagggagtcagattcaggga
gccccatcctcctcttatgtgtatgtcaaccctgatgatggacgagtctttgcccagcga
acttttgactatgaattgctgcagatgctgcagattgtggtgggggttcgagattctggc
tctccctcactgcatgccaacacatctctacatgtgtttgtccttgaccagaatgataat
gccccagctgtgctgcacccaaggccaggcagggaattctcagccccccaacgtctccct
cgctctgctcctcctggctccttggtcaccaaggtgacagccgtggacgctgatgcaggc
cacaatgcatggctctcttattccctgttgccacagtccacagccccaggattgttcctt
gtgtctgcacacactggtgaggtgcgcacagctagggctttactggaggatgactctgat
acccagcaggtggtggtcctcgtgagggacaatggtgacccttcactttcctctacagcc
acagtgctgctggttctggaggatgaagaccctgaggaaatgcccaaatccagtgatttc
ttcacacaccctcctgaacgttcagaccttactctttacctcattgtggctctagcagcc
atcagtctcttatccttagtgaccttcacctttatgtcagctaagtgccttcggggacag
gcagatggggacggtggtgggggccggtgctgcaggcatcaggactcaccctcccgggaa
ttttataagcagtctagtcccaacttgcaggtgagctcagatggtacacttaagtacatg
gaggtgacgctacggcccacagactcgcaaagccattgctacaggacgtgcttttcacca
gcctctgacggcagtgacttcactttcctcaggccgctcagcgttcagcaaccctcagct
ctggcgctggagccggatgcctttcgttcacactgtaatacgctgcgggacaggagccag
caagccccacccaacacggactggcgtttctctcaggcccagagacccggcaccagcggc
tcccaaaatggtgatgaaactggcacctggcccaacaaccaatttgacacagagatgctg
caagccatgatcttggcctccgccagtgaagctgctgatgggagctccaccctgggagga
ggcgctggtaccatgggcttgagtgcccgctacggaccccagttcaccctacagcacgtt
cccgactaccgccagaacgtctacatccctggcagcaatgccacactaaccaatgcacct
ggcaagcgggatggcaaggccccagctggtggcaatggaaacaagaagaagtctggcaag
aaggagaagaagtaa
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