KEGG   Sciurus carolinensis (gray squirrel): 124988380
Entry
124988380         CDS       T08117                                 
Name
(RefSeq) class I histocompatibility antigen, Gogo-B*0101 alpha chain-like
  KO
K06751  MHC class I antigen
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04144  Endocytosis
ncar04145  Phagosome
ncar04218  Cellular senescence
ncar04514  Cell adhesion molecules
ncar04612  Antigen processing and presentation
ncar04940  Type I diabetes mellitus
ncar05163  Human cytomegalovirus infection
ncar05165  Human papillomavirus infection
ncar05166  Human T-cell leukemia virus 1 infection
ncar05167  Kaposi sarcoma-associated herpesvirus infection
ncar05168  Herpes simplex virus 1 infection
ncar05169  Epstein-Barr virus infection
ncar05170  Human immunodeficiency virus 1 infection
ncar05203  Viral carcinogenesis
ncar05320  Autoimmune thyroid disease
ncar05330  Allograft rejection
ncar05332  Graft-versus-host disease
ncar05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124988380
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124988380
   04145 Phagosome
    124988380
  09143 Cell growth and death
   04218 Cellular senescence
    124988380
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    124988380
   04612 Antigen processing and presentation
    124988380
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    124988380
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    124988380
   05170 Human immunodeficiency virus 1 infection
    124988380
   05168 Herpes simplex virus 1 infection
    124988380
   05163 Human cytomegalovirus infection
    124988380
   05167 Kaposi sarcoma-associated herpesvirus infection
    124988380
   05169 Epstein-Barr virus infection
    124988380
   05165 Human papillomavirus infection
    124988380
  09163 Immune disease
   05320 Autoimmune thyroid disease
    124988380
   05330 Allograft rejection
    124988380
   05332 Graft-versus-host disease
    124988380
  09166 Cardiovascular disease
   05416 Viral myocarditis
    124988380
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    124988380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124988380
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ncar00537]
    124988380
Exosome [BR:ncar04147]
 Exosomal proteins
  Proteins found in most exosomes
   124988380
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ncar00537]
 Antigens
  124988380
SSDB
Motif
Pfam: MHC_I MHC_I_C C1-set C2-set_3 ig Ig_3 C2-set_2 Agarase_CBM DUF6215 LAX
Other DBs
NCBI-GeneID: 124988380
NCBI-ProteinID: XP_047413793
LinkDB
Position
7:complement(124692054..124695448)
AA seq 362 aa
MGVMAPRTLLLLLSGALALTQTRAGSHSMWYFDTAVSRPGRGEPRFISVGYVDDTQFVRF
DSDAATPRMEPRAPWMEKVGSEYWERNTQNVKGHAQTHRVNLDTLLRYYNQSEGGSHTIQ
TMYGCDVGPDGRLLRGYTQFAYDGADYIALNEDLRSWTAAVSAAQISQRKLEAAGVAEGH
RAYLEGTCVEWLARYLENGKETLQRADPPKTQVTHHTSPEGHITLRCWALGFYPKEITLI
WQRDGEDLTQDMELVETRPAGDGNFQKWAAVVVPAGEEQRYTCHVHHEGLPEPLALRWEP
PTWSTITIVGIVAGIFAGILVTVAVFAFVLWKKKKNRGVKKGIYAPAACNDSAQGSDVSL
TA
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgggggtgatggcgccgcgaacgctgctgctgctgctctcgggggccctggcgctgacc
cagaccagggcgggctcccactccatgtggtatttcgacaccgccgtgtcccggcccggc
cgcggggagccccgcttcatctccgtgggctacgtggacgacacgcagttcgtgcgcttc
gacagcgacgccgcgacgcccaggatggagccgcgggcgccctggatggagaaggtgggg
tccgagtattgggaacggaacacgcagaatgtcaagggccacgcgcagactcaccgagtg
aacctggacaccctgctccgctactacaaccagagcgagggcggctctcacaccatccag
acgatgtatggctgcgatgtggggccagacggacgcctcctccgcgggtacacgcagttc
gcctacgatggcgcggattacatcgccctgaacgaggacctgcgctcctggaccgcggcg
gtctcggcggctcagatctcgcagcggaagttagaggcggccggtgtcgcggagggtcac
agggcctacctggaggggacctgtgtggagtggctcgccagatacctggagaacgggaag
gagacgctgcagcgcgcggaccccccaaagacacaggtgactcaccacactagccctgaa
ggacacatcactctgaggtgctgggccctgggcttctaccctaaggagatcaccctgata
tggcaacgagatggggaggacctgacccaggacatggaacttgtggagaccaggcctgca
ggggatggaaacttccagaaatgggcagctgtggtggtgcctgctggagaggaacagaga
tacacgtgccatgtgcatcatgaggggctgcctgagcccctggccctgagatgggagcca
cccacttggtccaccatcaccattgtgggaattgttgctggaatctttgctggaatcctt
gtcactgtagctgtgttcgcttttgtcttgtggaagaagaagaaaaacagaggtgtaaaa
aaagggatctatgcaccagctgcctgtaacgacagtgcccagggctctgatgtgtctctg
actgcttaa

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