Sciurus carolinensis (gray squirrel): 124989127
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Entry
124989127 CDS
T08117
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3 isoform X1
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04064
NF-kappa B signaling pathway
ncar04217
Necroptosis
ncar04621
NOD-like receptor signaling pathway
ncar04657
IL-17 signaling pathway
ncar04668
TNF signaling pathway
ncar05162
Measles
ncar05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
124989127
04668 TNF signaling pathway
124989127
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124989127
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124989127
04657 IL-17 signaling pathway
124989127
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
124989127
05169 Epstein-Barr virus infection
124989127
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124989127
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124989127
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124989127
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C64
124989127
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
124989127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
124989127
NCBI-ProteinID:
XP_047415050
LinkDB
All DBs
Position
7:complement(27283029..27297505)
Genome browser
AA seq
790 aa
AA seq
DB search
MAEQLLPQALYLSNMRKAVKIRERTPEDIFKPTNGIIHHFKTMHRYTLEMFRTCQFCPQF
REIIHKALIDRSIQASLESQKKLNWCREVRKLVALKTNGDGNCLMHAACQYMWGVQDTDL
VLRKALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMASTDTP
AARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPA
QECYRYPIVLGYDSQHFVPLVTLKDSGPEIRAVPLVNRDRGRFEDLKIHFLTEPENEMKD
KLLKEYLMVIEIPVQGWDHGTTHLINAAKLDEANLPKEINLVDDYFELVQHEYKKWQENN
EQGRRGARAQNPVEPSTPQLSLMDVKCETPNCPFFMSVNTQPFCHECSERRQKNQNKLPK
LNFKPGPDGLPGVALGASRGEAYEPAAWSPEESAGGPHSAPPTAPSLFLFSETTAMKCRS
PGCPFTLNVQHNGFCERCHNARQLNANHTTDTTRHLDPGKCRACLQDVTRTFNGICSTCF
KRTTAEPSSSLGSSLPPSCHQRSKSDPSQLIQSLSPHSCHRAGNEDPSGCLSQASRTPGD
RTGTSKCRKAGCVYFGTPENKGFCTLCFIEYRENKHFGTASGKASPTASRFQNAVPCLGR
ECGTLGSTMFEGYCQKCFIEAQNQRFHEAKRTDQQLRSSQRRDVPRTTQGASRPKCARAS
CKNILACRSEELCMECQHLSQRVGPGAHRGESTAEEPPKQRCRAPACDHFGNAKCNGYCN
ECFQFKQMYG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagctccttcctcaggctttgtatttgagtaatatgcggaaagctgtgaag
ataagagagcgaactccagaagacatttttaaacctaccaatgggatcattcatcatttt
aaaaccatgcaccgatacacactggaaatgttcagaacttgccagttttgtccccagttc
cgggagatcatccacaaagctctcattgacagaagcatccaggcttctctggaaagccag
aagaagctcaactggtgtcgggaagtgaggaagctcgtggcactgaaaaccaatggtgat
ggaaattgcctcatgcatgctgcttgtcaatacatgtggggtgtccaggacacagacctg
gtcctgaggaaggcactcttcagcactctcaaggagacagacacacgcaattttaaattc
cgctggcagctggaatctctgaaatctcaggaattcgtggaaacggggctttgctatgat
actcggaactggaatgatgaatgggacaaccttatcaaaatggcatccacagacacccca
gcagcccgaagtggacttcagtataattcactggaagaaattcatatatttgttctttgc
aacatcctcagaaggcccatcattgtcatttcagacaaaatgctgagaagtttggaatca
ggttccaatttcgcccctttgaaagtgggtggaatatacttgcctctccactggcctgcc
caggaatgctacagataccccattgtcctcggctatgacagccagcactttgtacccctg
gtgactctgaaggacagtgggcctgaaatccgagctgttccgcttgtcaacagagaccga
ggaagatttgaagacttaaaaattcactttctgacagagcctgaaaatgagatgaaggac
aagctcttgaaggagtacttgatggtgatagaaatcccagtccaaggctgggaccacggc
acgactcatctgattaatgctgcaaagttggatgaagctaatttaccaaaggaaataaac
ctggtcgatgattactttgaacttgtgcagcacgagtacaagaagtggcaggagaacaac
gagcaggggaggagaggggcgcgtgcacagaaccctgtggaaccttccacgccccagctt
tctctcatggatgtaaaatgtgaaacgcccaactgccctttcttcatgtctgtgaacacc
cagcctttctgccatgagtgctcagagaggcggcagaagaaccaaaacaaattgccgaag
ctgaacttcaagccaggcccggatgggctgcctggtgtggcactcggggcctctcgggga
gaggcctacgagcccgcggcctggagccctgaggagtcagccggagggcctcattcagcc
ccaccaacagcgcccagccttttcctgttcagcgagaccaccgccatgaaatgcaggagt
cccggctgccctttcaccctgaatgtgcagcacaacggattttgtgagcgttgccacaat
gcccggcagcttaatgccaaccacaccacagacaccacgaggcatttagatcctggtaag
tgccgggcctgcctccaggacgttaccaggacatttaatgggatctgcagtacttgcttc
aaaaggactacggcagagccctcctccagcctaggttccagcctccctccttcctgtcac
cagcgatccaagtcagacccctcacagctcatccagagtctttccccgcactcttgccac
agagctggaaacgaggacccctctggctgcctctcccaagcctcacggactccaggggac
aggaccgggactagcaagtgcagaaaagctggctgtgtgtattttgggactccagaaaac
aagggattttgcacgctgtgtttcatcgagtatagagaaaacaaacattttggcactgcc
tctgggaaagccagtcccacggcctccaggttccagaatgctgttccgtgcctcgggagg
gagtgcggcacccttggaagcaccatgtttgaaggatactgtcagaaatgcttcattgaa
gctcagaaccagagatttcatgaagcaaaaaggactgaccagcaactgagatcgagccag
cgcagagacgtgcctcgaaccacacagggggcctcaaggcccaagtgtgcccgggcctct
tgcaagaacatcctggcctgccgcagcgaggagctctgtatggagtgccagcacctcagc
cagcgggtgggccctggggcccaccggggtgagtctactgccgaagagccccctaaacag
cgctgccgggcccctgcctgcgatcactttggcaacgccaagtgcaacggctactgcaac
gaatgctttcagttcaagcagatgtatggctaa
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