Sciurus carolinensis (gray squirrel): 124991027
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Entry
124991027 CDS
T08117
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial isoform X1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00020
Citrate cycle (TCA cycle)
ncar00785
Lipoic acid metabolism
ncar01100
Metabolic pathways
ncar01200
Carbon metabolism
ncar01210
2-Oxocarboxylic acid metabolism
Module
ncar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ncar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
124991027
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
124991027
Enzymes [BR:
ncar01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
124991027
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
GGA_N-GAT
Motif
Other DBs
NCBI-GeneID:
124991027
NCBI-ProteinID:
XP_047417631
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All DBs
Position
8:102444780..102523554
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AA seq
1034 aa
AA seq
DB search
MFHLRTCAAKLRPLTASQTVKTFSQNKPAAIRTFQHIRCYSAPVAAEPFLSGTSSNYVEE
MYCAWLENPKSVHKSWDIFFRNTNAGAPPGTAYQSPLSLSRGSLATVAHAQSLVDAQPNV
DKLVEDHLAVQSLIRAYQVRGHHIAKLDPLGISCVNFDDAPVTVSSNVDLAVFKERLRML
TVGGFYGLDESDLDKVFHLPTTTFIGGQESALPLREIIRRLEMAYCQHIGVEFMFINDLE
QCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPA
LKTIIDKSSENGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMKY
HLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKKVMSILLH
GDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVN
APIFHVNADDPEAVMYVCKVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQ
IRKQKPVLQKYAELLVSQGVVNQPEYEEEISKYDKICEEAFTRSKDEKILHIKHWLDSPW
PGFFTLDGQPRSMSCPSTGLEEDVLTHIGNVASSVPVENFTIHGGLSRILKTRKELVTNR
TVDWALAEYMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPN
QAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFNNMAQCIIDQFICPGQAKW
VRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVLPDLTESNFDINQLYDCNWVV
VNCSTPGNFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARTNFDEMLPGTHFQRVIPEDG
PAAQAPDKVKRLLFCTGKVYYDLTRERKARDMAEQVAITRIEQLSPFPFDLLLKEVQKYP
NAELAWCQEEHKNQGYYDYVKPRLRTTIDRAKPVWYAGRDPAAAPATGNKKTHLTELQRF
LDTAFDLDAFKKFS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatttaaggacttgtgctgctaagttgaggccattgacggcttctcagactgtt
aagacattttcacaaaacaaaccagcagcaattaggacgtttcaacacattcggtgctat
tctgcacctgtcgctgctgaaccctttctgagtgggactagttcgaactatgtggaggag
atgtactgtgcttggctggagaatcccaaaagtgtacataagtcatgggacatttttttc
cgcaacaccaatgctggagctcccccgggcactgcctaccaaagccctctttccctgagc
cgaggctccctggctactgtggcccacgcacagtccctggtggatgcacaacccaacgtg
gacaagcttgtggaagaccacttggcagtacagtctctcatcagggcatatcaggtcagg
ggtcaccacattgcaaaacttgatcctctcggaattagttgtgtaaattttgatgatgct
ccagtaactgtttcttcaaacgtggatcttgcagttttcaaggaacgacttcgaatgcta
acagtaggagggttctatggcctggatgaatctgaccttgacaaggtcttccacttgcct
actactacgttcatcgggggacaggagtcagcacttcctctgcgggagatcatccgtcga
ctggagatggcctactgccagcatattggagtggaattcatgttcattaatgacttggag
caatgtcagtggatcaggcagaagtttgagacccctgggatcatgcagttcaccaatgag
gaaaagcgaactctgctggccaggcttgtgcggtccaccaggtttgaggaattcttgcac
cggaagtggtcttcagagaagcgctttggtctagaaggctgtgaggtgctgatccctgcc
ctcaagaccatcatcgacaagtcaagtgaaaatggagtggactatgtaataatgggaatg
ccacacaggggacggctgaacgtgcttgcgaatgtcatcaggaaggagttggagcagatt
ttctgtcagtttgattcaaagctggaggcagctgatgagggttccggagacatgaagtat
cacctgggcatgtatcaccgcaggatcaaccgtgtgactgaccgaaatatcaccctatcc
ctggtggcaaacccttcccacctggaggctgctgaccctgttgtcatgggcaagaccaaa
gctgagcagttctactgtggggacactgaagggaaaaaggtgatgtccatcctcctgcat
ggggatgctgcctttgctggccagggcattgtgtacgagaccttccacctcagtgacctg
ccatcctacaccacccatggcactgtgcatgtggtcgtcaacaaccagattggcttcacc
acagaccctcggatggcccgctcctccccataccccactgatgtagcacgtgtggtgaat
gctcccattttccatgtgaatgccgatgaccccgaagctgtcatgtatgtgtgcaaggtg
gcagctgagtggagaagtaccttccacaaggatgtggttgtcgatctggtatgttaccga
cgcaatggccacaacgagatggatgagcccatgttcacacagcctcttatgtacaagcag
atccgcaagcagaaacctgtgctacagaagtacgcagagctgctagtgtcccagggtgtg
gtcaaccagcctgaatatgaggaggaaatctccaagtacgataagatttgtgaggaagca
tttaccagatccaaagatgagaagatactgcacatcaagcactggcttgactccccctgg
cctggcttcttcaccctggatgggcagcctaggagcatgtcctgcccctccaccggcctg
gaggaagatgttctgacccacatcgggaatgtggccagctctgtgcctgtagagaacttc
accatccatggagggctgagtcggatcttgaagactcgcaaggagctggtgacaaaccgg
actgtggattgggctctggcagagtatatggcattcggttcactcctgaaggagggcatc
catgtccggctgagtggccaggatgtggagcggggcaccttcagccaccgccaccatgtg
ctccatgaccagaatgtagataagagaacctgcatccccatgaaccacctctggcccaat
caggcaccatacactgtgtgcaatagctcactgtctgagtatggtgtcctgggctttgaa
ctgggctttgccatggctagccctaatgccctggtcctctgggaggcccagtttggtgac
ttcaacaacatggcccagtgcatcattgaccagttcatctgcccagggcaggccaagtgg
gtacgacagaatggcattgtgttgctcctgcctcatggcatggagggcatgggtccagaa
cattcctccgcccgcccagagcggttcctgcagatgtgcaatgatgatccagatgtcctg
ccagaccttacagaatccaactttgacatcaatcagctatatgactgcaactgggtcgtt
gtcaactgctccactcctggcaacttcttccatgtgctgcgacggcagatcctgttgccc
ttccggaagccgttaatcatctttacacccaaatccctgctacgtcaccccgaggccaga
accaactttgatgagatgcttccaggaacccactttcagagggtgatcccagaagatggc
cctgcagctcaggccccagacaaagtcaagaggcttctcttctgcactggcaaggtgtac
tacgaccttacccgagagcgcaaggcaagggacatggcagagcaggtggccattacaaga
attgagcagctgtcaccattcccctttgacctcctgctgaaggaggtgcagaagtacccc
aatgctgagctggcctggtgccaggaagaacacaagaaccaaggctactacgactatgtg
aagccgagacttcggaccaccatcgatcgcgccaagcctgtctggtatgctggccgggat
ccagcagctgctccagccactggcaacaagaaaacccatctgacagagctacagcgcttc
ctagacacagcctttgatctggatgccttcaaaaaattctcttag
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