Sciurus carolinensis (gray squirrel): 124992449
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Entry
124992449 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 2-like
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04621
NOD-like receptor signaling pathway
ncar04921
Oxytocin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124992449
09152 Endocrine system
04921 Oxytocin signaling pathway
124992449
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124992449
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
124992449
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124992449
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Cortex-I_coil
Motif
Other DBs
NCBI-GeneID:
124992449
NCBI-ProteinID:
XP_047419161
LinkDB
All DBs
Position
9:139721951..139775440
Genome browser
AA seq
1557 aa
AA seq
DB search
MQGGLRCSLGAGAGRRAGEGEDASRRGAGCLPWCVCRNPNLARQPPRRREQAEARVRMEP
LAPRRAGSEQEEGFGVQPRRVTDLGMVPNLRRSHSSLCKSRRLPCPLSSSEKQENLSSWI
PENIKKKECLYFVESAKLSDAGRVVCMCGYTREQHLEEATKPLSFRGKEWDPKKHVQEVP
TDAFGDIVFPGLGQKVGKYVRVSQDTPSSVIYHLMTQHWGLDVPNLLISVTGGAKNFNMK
LRLKSIFRRGLVKVAQTTGAWIITGGSHTGVMKQVGEAVRDFSLSSSYKEGEVITIGVAT
WGTIHNREGLVHPTGGFPAEYVLDEEGQGKLTCLDSNHSHFILVDDGTHGQYGVEIPLRT
KLEKFISEQTKERGGVAIKIPIVCVVLEGGPGTLHTIYNAITNGTPCVIVEGSGRVADVI
AQVANRPVSEITISLIQQKLSMFFQEMFETFTESRVVEWTKKIQDIVRRRQLLTIFREGK
DGQQDVDVAILQALLKASRSQDHFGHENWDHQLKLAVAWNRVDIARSEIFTDQWQWKPSD
LHPTMTAALISNKPEFVKLFLENGVRLKELVTWDTLLYLYENLEPSCLFHCKLQKVLAEE
HLACAPAAPRLQMHHVAQVLRELLGDSTQPLYPRPKHSDRPRLSLPVPHIKLNVQGVSLR
SLYKRSSGHVTFTMDPVRDLLIWAIVQNRRELAGIIWAQSQDCIAAALACSKILKELSKE
EEDTDSSEEMLALADEYEQRAIGVFTECYRKDEERAQKLLIRVSEAWGKTTCLQLALEAK
DMKFVSHGGIQAFLTKVWWGQLCVDNGLWRVILCMLAFPLLFTGLISFREKRPQALGGPA
RACAFFTAPVVVFHLNVLSYFAFLCLFAYVLMVDFQPTPSWCERLIYLWLFSLVCEETRQ
LFYDPDESGLVKMASLYFSDFWNKLDVAAIMFFIAGLTCRLIPSTLYPGRIILSLDFIMF
CLRLMHIFTVSKTLGPKIIIVKRMMKDVFFFLFLLAVWVVSFGVAKQAILIHNESRVDWI
FRGVVYHSYLTIFGQIPAYIDGVNFDVDQCSPNGTDPYKPKCPESDAARQAPAFPEWLTV
LLLCLYLLFTNILLLNLLIAMFNYTFQQVQEHTDQIWKFQRHDLIEEYHGRPPAPPPFIL
LSHLQLLVKRVVLKIPAKRHKQLKNKLEKNEEAALLSWEIYLKENFLQNQQYQHHQQPEQ
KIRDISSKVDTMVELLDMDRLKRSSSVEQRLASLEEQVAQTTRALHWIVTTLKDSGFGSE
AGVPTLAPQKACDEPDADLGARRKAEEPGDGYHVNARHLLYPSSPVTRFPVPNEKVPWEV
EFTIYDPPFYTAERKDVALVDPVGDTPQPLSKITYNALDGPRDRRSFHGAYVVRDGLPLN
PMGRTGLRGRGSLSYFGPNHALHPVVTRWRRNQDGAICRKSIKKMLEVLVVKWPLSELWA
LPGGSREPGEMLPQKLKQILRQESWPAVENLLKQGVEVYKGYVDDPRNTDNAWIETVAIS
VHFQDQNDVELKRLNSSWHARDPGVSIRWQVVDRRIPLYADHKALLQEAAALFGAHY
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcgggctgcggtgcagtctaggcgctggtgcggggcgccgggctggcgagggg
gaggacgcgtcccgcaggggcgcgggctgcctcccatggtgtgtttgcagaaaccccaac
cttgcaagacagcccccaaggaggagagagcaggctgaagccagagtcaggatggagccc
ttggccccaaggagagctggctctgagcaggaggagggctttggggtacagcccaggagg
gtcactgatctgggtatggtccccaacctccggcgaagccacagcagcctttgcaagagt
aggagactgccgtgtcccctcagcagcagtgaaaagcaagaaaatctcagctcgtggatc
cctgaaaacatcaagaagaaggagtgcctgtatttcgtggagagcgccaaactgtccgac
gctgggagggtggtgtgtatgtgtggctacacccgcgagcagcacctggaggaggccacc
aagccgctcagcttccggggcaaggagtgggacccgaagaagcacgtgcaggaggtgccg
acggacgccttcggtgacatcgtcttccctggcctgggccagaaagtgggcaagtatgtc
cgcgtctcccaggacacaccctccagcgtgatctaccacctgatgacccagcactggggc
ctggatgtccccaaccttctcatctcggtgactggtggagccaagaacttcaacatgaag
ctgaggctgaagagcatcttccggagaggcctggtcaaggtggcccagaccacaggggcc
tggattatcacggggggctcgcacactggtgtgatgaagcaggtgggcgaggccgtgcgg
gacttcagcctgagcagcagctacaaggagggggaagtgatcaccattggagtggccacc
tggggcaccatccacaaccgggaggggctggtccatcctacgggcggcttcccggcggag
tacgtgctggacgaggagggccaaggcaagctgacctgcctggacagcaaccactcccac
ttcatcctcgtggacgacggcacccacggccagtacggggtggagatccccctgaggact
aagctggagaagttcatatcggagcagacgaaggagagagggggtgtggccatcaagatt
cccatcgtctgtgtggtgctggagggcggccccggcacgctgcacaccatctacaacgcc
atcaccaacggcaccccctgtgtgattgtggagggctcaggccgcgtggccgacgtcatc
gcccaggtggccaaccggccggtctccgagatcaccatctccctgatccagcagaagctc
agcatgttcttccaggagatgttcgagaccttcacggaaagcagagttgtcgagtggacc
aaaaagatccaagacattgttcggaggcggcagctgctgaccatcttccgggaaggcaag
gatggtcagcaggatgtggacgtggccatccttcaggctttgctgaaagcttcccggagt
caagaccactttgggcatgagaactgggaccatcagctgaagctggccgtggcctggaac
cgcgtggacatcgcccgcagtgagatcttcactgaccagtggcaatggaagccctcagat
ctgcaccccacgatgacggccgccctcatctccaacaagccggagttcgtgaagctgttc
ctggagaacggggtgcggctgaaggagttggtcacctgggacacgctgctctacctgtac
gagaacctggagccctcctgcctgttccactgcaagctgcagaaggtcctggcggaggag
cacctggcctgtgcgcccgccgcgccccggctgcagatgcaccacgtggcccaggtgctg
cgcgagctcctgggggactccacgcagccgctgtacccccggcccaagcacagcgaccgg
ccgcgcctctccctgcccgtgcctcacatcaagctcaacgtgcagggagtgagcctccgg
tccctctacaagcgttcatccggccatgtcaccttcaccatggacccagttcgggacctt
ctcatttgggccatcgtgcagaaccgtcgggagctggcagggatcatctgggcgcagagc
caggactgcatcgcggcagcactggcctgcagcaagatcctgaaggaactgtccaaggag
gaggaggacacggacagctccgaggagatgctggcgctggcggacgagtatgaacagaga
gccattggggtcttcaccgagtgctaccggaaggatgaagagagagcccagaagctgctc
atccgcgtgtcggaggcctgggggaagaccacctgcctgcagttggccctggaggccaag
gacatgaagttcgtgtctcatggcggcatccaggccttcctgaccaaggtgtggtggggc
cagctctgcgtggacaacggactgtggcgggtgatcctgtgcatgctggccttcccactg
ctcttcacgggcctcatctccttcagggagaagcggccccaggcgctgggtggccccgcc
cgcgcctgcgccttcttcacggcgcccgtggtggtcttccacctgaacgtgctgtcctac
ttcgccttcctctgcctcttcgcctacgtgctcatggtggacttccagcccacgccctcc
tggtgcgagcgcctcatctacctctggctcttctccctggtgtgcgaggagacgcggcag
ctcttctacgaccccgacgagagcgggctggtgaagatggcgtccttgtacttcagcgac
ttctggaacaagctggacgtggctgccatcatgttcttcatcgcagggctgacctgccgg
ctcatcccgtcgacgctgtacccggggcgcatcatcctctctctggacttcatcatgttc
tgcctccgtctcatgcacatttttaccgtcagcaagactctggggcccaagataatcatc
gtaaagcggatgatgaaggacgtcttcttcttcctcttcctgctggcggtgtgggtggtg
tcctttggggtggccaagcaggccatccttatccacaacgagagccgggtggactggatc
ttccgaggggtcgtctaccactcctacctcaccatcttcgggcagatcccagcctacatc
gatggtgtgaacttcgacgtggaccagtgcagccccaatggcacggacccctacaagccc
aagtgccccgagagcgacgcggcccggcaggcgcccgccttccccgagtggctgacggtg
ctcctgctctgcctctacctgctcttcactaacatcctgctgctcaacctcctcatcgcc
atgttcaactacacgttccagcaggtccaggagcacacggaccagatctggaagttccag
cgccatgacctgatagaggagtaccacgggcggccccccgcgccaccccctttcatcctc
ctcagccacctgcagctcctggtcaagagagtggtcctgaagatcccagccaagaggcac
aagcagctcaagaacaaactggagaagaatgaggaggcagccctcctgtcctgggagatt
tacctgaaggagaacttcctgcagaaccagcagtaccagcaccaccagcagccagagcag
aagattcgagacattagcagcaaggtggacaccatggtggagctgctggacatggaccgt
ttgaagagatcgagctccgtggaacagagactggcctccctggaggaacaggtggcgcag
acgaccagagctctgcactggatcgtgacgaccctgaaggacagtggctttggctcggag
gcaggcgtgcccactctggcaccccagaaggcctgcgacgagccagatgctgacctgggc
gccaggaggaaggcggaggagccaggagatggctatcacgtgaacgcccggcacctcctc
taccccagctcccccgtcacacgcttccccgtgcccaacgagaaggttccctgggaggtg
gaatttacgatctacgaccctcccttttacacggccgagaggaaggacgtggctctcgtg
gaccccgtgggagacaccccgcagcctctgtccaagatcacctacaacgccctggacgga
ccgagggaccggcgcagcttccacggggcctacgtggtgcgggacgggctccccctgaac
cccatgggccgcacagggctgcgtggacgcgggagcctcagctactttggacccaaccat
gcactgcaccctgtggtcacccggtggaggaggaaccaggacggagccatctgcaggaag
agcatcaagaaaatgctggaggtgctggtggtaaagtggcctctctcggagctctgggcc
ctgccaggggggtcccgggagccaggggagatgctgccgcagaagctgaagcagattctc
cggcaagagtcctggccggctgttgagaacttgctgaagcagggcgtggaggtgtacaaa
gggtatgtggacgatccgaggaacacagacaatgcctggatcgagacagtggccatcagt
gtccacttccaggaccagaatgacgtggaactgaagagactgaactcttcctggcacgcc
cgcgaccccggggtgtccatccgatggcaggtggtggacaggcgcatccctctgtacgct
gaccacaaggccttgctccaggaggcagccgctctgttcggagctcactactga
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integrated database retrieval system
