Sciurus carolinensis (gray squirrel): 124992998
Help
Entry
124992998 CDS
T08117
Name
(RefSeq) cystathionine beta-synthase isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00260
Glycine, serine and threonine metabolism
ncar00270
Cysteine and methionine metabolism
ncar00670
One carbon pool by folate
ncar01100
Metabolic pathways
ncar01230
Biosynthesis of amino acids
Module
ncar_M00035
Methionine degradation
ncar_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
124992998
00270 Cysteine and methionine metabolism
124992998
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
124992998
Enzymes [BR:
ncar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
124992998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-GeneID:
124992998
NCBI-ProteinID:
XP_047420419
LinkDB
All DBs
Position
9:complement(138806475..138832816)
Genome browser
AA seq
561 aa
AA seq
DB search
MPSETPQAEEGSAGCPHHLGKGSLERGPLGDKEAKEHLWIPPDTPSRCTWQLGRPVTDSP
HHHVTLTKSPKILPDVLRKIGNTPMVRINKIGKNAGLQCELLAKCEFFNAGGSVKDRISL
RMIEDAERAGTLRPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRAL
GAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDATAEEILQQC
DGKLDMLVATAGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTFYEVE
GIGYDFIPTVLDRAVVDKWFKSSDQESFTFARMLIAQEGLLCGGSSGSAMAVAVKAAQDL
QEGQRCVVILPDSVRNYMSKFLSDKWMLQKGFLKEEDLSVKRPWWWHLRVQELSLSAPLT
VLPTVTCEHTITILREKGFDQAPVVEESGAILGMVTLGNMLSSLLAGKVQPSDQVSKVIY
KQFKPIRLTDTLGTLSHVLEIDHFALVVHEQIQSRDQAWSGVVGGPADHSNGKSSERQMV
FGVVTAIDLLNFVAAREQDGK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggagacaccccaggcagaagaggggtctgcagggtgcccccaccacttgggg
aaagggagccttgagaggggacctctaggggacaaggaggccaaggagcatctgtggatc
ccgcctgacacccccagcaggtgcacctggcagctgggcaggcctgtcaccgactccccg
catcaccacgtcactctgacaaaatctccaaaaatcttgccagatgttctgaggaaaatc
gggaacaccccgatggtcagaatcaacaagatcgggaagaacgccggcctccagtgcgag
ctcttggccaagtgtgagttcttcaacgcgggtggaagtgtgaaggaccgcatcagcctg
cggatgatcgaggacgccgagcgtgctgggactctgagacccggggacacaatcatcgag
ccgacgtctgggaacacagggatcgggctggcgctggccgcggctgtgaagggctatcgc
tgcatcatcgtgatgcccgagaagatgagcatggagaaggtggacgtcctgcgggccttg
ggggcggagatcgtgaggacacccaccaacgccaggtttgactccccggagtcccacgtg
ggggtggcgtggcggctgaagaacgagatccccaattctcacatcctggaccagtatcgc
aatgccagcaaccccctggctcactacgacgccaccgcggaggagatcctgcagcagtgt
gatggaaagctggacatgcttgtggctactgcgggcacgggcggtaccatcacgggcatc
gccaggaagctgaaggagaagtgtcctgggtgcagaatcattggggtggacccagaaggg
tccatcctcgcagaaccagaagagctgaaccagacggagcagacattctacgaggtggaa
gggattggctacgacttcatccccacagtgctggacagggcggtggtggacaagtggttc
aagagcagcgaccaggagtccttcacctttgcccgcatgctgatcgcacaggaaggactg
ttgtgtggcggcagctccggcagcgccatggctgtggctgtgaaggcggcgcaggatctg
caggagggtcagcgctgtgtggtcatcctgcccgactcagtgcgtaactacatgtccaag
ttcctgagtgacaagtggatgctacagaagggctttctgaaggaggaagacctctccgtg
aagaggccatggtggtggcacctgcgagttcaggagctgagcctgtcagcccctctgacc
gtgctgcccacggtcacctgtgagcacaccatcaccatcctccgtgagaagggcttcgac
caggcgcccgtggtggaggagtcaggggccatcctgggaatggtgactcttgggaacatg
ctgtcgtccctgcttgctgggaaggtgcagccttcagaccaggtctccaaagtcatctac
aagcagttcaaaccgatccgcctgacggacacgctgggcacgctctctcacgtcctggaa
atcgaccacttcgccctggtggtccacgagcagatccagtcacgggaccaggcctggtca
ggagtggtgggggggcctgcagaccacagcaatggcaagtccagtgagcggcagatggtg
ttcggggtcgtcaccgccattgacctgctgaacttcgtggcggcccgcgagcaggatggg
aaataa
DBGET
integrated database retrieval system
