Sciurus carolinensis (gray squirrel): 124993038
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Entry
124993038 CDS
T08117
Name
(RefSeq) clarin-1 isoform X1
KO
K23841
clarin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124993038
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
USH complex and associated proteins
124993038
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Gene cluster
GFIT
Motif
Pfam:
Clarin-2
PsbN
DUF4064
Motif
Other DBs
NCBI-GeneID:
124993038
NCBI-ProteinID:
XP_047420510
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Position
9:complement(1309926..1342101)
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AA seq
232 aa
AA seq
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MPNQQKKIIFCLAGVLSFVCALGVVTALGTPLWIKATILCKTGALLVNASGQELDKFTGE
LQYGLFHGRGVRQCGLGARPFRFSFFPDLLKAIPVSIHVNVILFSTILTVVTMAGTALFM
YNAFGKPFETLHGPLGLYLLSFISGSCGCLVMILFASEVKIHHLSEKIANHEEGTYAYKT
QGETYATCFWVVFVCFFVHFLNGLLIRLAGFQFPFAKSKDTETTNVAADLLY
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccaacagaagaagatcattttttgcctggccggggtgttaagtttcgtgtgt
gccctcggagttgtgacagccctggggacaccgctgtggattaaagccaccattctctgc
aaaaccggggccctgctggtcaacgcctccgggcaggagctggacaagttcacgggtgag
ctgcagtacggccttttccacgggcggggcgtccggcagtgcgggctgggagcaaggccc
tttcgcttctcctttttcccagacttgctgaaagccatcccagtgagcatccacgtcaac
gtcattctcttctccaccatcctgactgtcgtgaccatggcgggcacggccctcttcatg
tacaatgcttttggcaaaccctttgagactctgcatggtccccttgggttgtatctgctg
agtttcatttcaggctcctgtggctgtctagtcatgatcttattcgcctctgaagtgaaa
atccaccacctctcggaaaaaatcgcgaatcatgaggaaggaacttatgcctacaaaact
cagggcgagacctacgccacctgcttctgggtggtctttgtttgcttttttgttcatttt
ctgaatgggctcctaatacgactcgctggatttcagtttccttttgcaaaatccaaagat
acagagacaacgaatgtcgctgcggatttgctgtactga
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