KEGG   Niveispirillum cyanobacteriorum: C0V82_01990
Entry
C0V82_01990       CDS       T05262                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
ncb  Niveispirillum cyanobacteriorum
Pathway
ncb03030  DNA replication
ncb03410  Base excision repair
ncb03420  Nucleotide excision repair
ncb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ncb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C0V82_01990
   03410 Base excision repair
    C0V82_01990
   03420 Nucleotide excision repair
    C0V82_01990
   03430 Mismatch repair
    C0V82_01990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncb03032]
    C0V82_01990
   03400 DNA repair and recombination proteins [BR:ncb03400]
    C0V82_01990
Enzymes [BR:ncb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     C0V82_01990
DNA replication proteins [BR:ncb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C0V82_01990
DNA repair and recombination proteins [BR:ncb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     C0V82_01990
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C0V82_01990
   MMR (mismatch excision repair)
    DNA ligase
     C0V82_01990
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C0V82_01990
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 DNA_ligase_ZBD HHH_5 PTCB-BRCT Nlig-Ia
Other DBs
NCBI-ProteinID: AUN29152
UniProt: A0A2K9N843
LinkDB
Position
eg_1:complement(453680..455824)
AA seq 714 aa
MSSPHRLTEVDALTLEDAASEHAALAAEIGHHRERYYNKADPEISDADYDKLEQRLAAIE
VRFPELVTADSPTQTVGAAPSSGFGKVKHAVPMLSLSNAFEDVDVSDFVGRIRRFLNLSD
DTPVSFVAEPKIDGLSLSLRYEKGRLVQAATRGDGAEGEDVTANVRTIRDIPHELTAPFP
DLVEVRGEVYMTRADFLELNRAQAEKNDKIFANPRNAAAGSLRQLDSSITAGRPLRFFAY
AWGALSEPLGATQWESRQRLEGFGFTLSSPSERCTDAEALLAYYRMIGQQRPTLPFDIDG
VVYKVDSLALQERLGFISRSPRWATAHKYPAEQATTRLKAISIQVGRTGALTPVAELEPV
NVGGVVVSRATLHNKDEIERKDIRVGDLVIVQRAGDVIPQIVGWVGWVSEPEKGRAEPFK
FPDRCPECDSIATREEGEVVTRCTGGLICPAQAVERLRHFVSRNAFDIEGLGIERIQLFF
EQGRIKQPADIFTLEVREEQRLDRLISMTGFGKKSVEKLFAAIEARRTIALDRFIFALGI
RQIGEATAKLLAKAYRTAENWRDRMVAAAAERADKREEKKPELVGEAYAELCAIEQIGMS
VADDLTDFFREQHNLDAVAALLAQVRPEEYVPPAAATTSPVAGKTVVFTGTLTTMGRSEA
KAKAEALGAKVAGSVSAKTDYVIVGADAGSKAAKAQELGVTILSEEEWAALIAG
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgtcctccccccaccgcctgaccgaagtcgatgccctgaccctggaggacgcggccagc
gaacatgcggccctggcggcggaaatcgggcaccatcgcgaacgctactacaacaaggcc
gatccggagatttcggacgccgactatgacaagctggaacagcgtctggccgccatcgag
gtacgttttcccgaactggtgaccgccgacagcccgacacagacggtgggtgccgccccc
tcctccggctttggcaaggtcaagcatgcggtgccgatgctgtcgctgtcgaacgcgttc
gaggatgtggatgtcagcgactttgtgggccgcatccgccggttcctgaacttatccgac
gacacgccggtcagcttcgttgctgagcccaagatcgacggcctgtctttgtccctgcgc
tatgagaagggccggctggtccaggccgccacgcgcggcgacggggcagagggggaggat
gtgacggccaatgtccgcaccatccgcgatatcccgcatgaattgacagcccccttcccc
gatctggtggaggtgcggggcgaagtctatatgacccgtgcggacttcctggagctaaac
cgggcgcaagcggaaaagaacgacaagatcttcgccaacccgcgcaacgccgccgccgga
tcgctgcgccagttggacagcagcatcacggcgggccggcccctgcgcttcttcgcctat
gcctggggggcgttgtcggaaccactgggtgccacgcagtgggaaagccggcagcggctg
gaaggtttcggcttcaccctgtcgtcgccatccgaacgctgcaccgacgcagaggcgttg
ctggcctattaccgcatgattgggcagcagcggcccaccctgcccttcgacattgacggt
gtcgtctacaaggtcgacagcctggcccttcaggaacgtctgggcttcatctcccgctcc
ccccgctgggccacggcgcataaataccccgccgagcaggcaaccacccgcctgaaagcc
atcagcatccaggtgggccgcaccggcgccctgacgcccgtggcggagctggagcccgtg
aatgtcggtggcgtggtggtcagccgcgccaccctgcacaacaaggatgagattgagcgg
aaggacatccgcgtcggcgatctggtcatcgtgcagcgcgcgggcgatgtgattccgcag
attgtgggttgggttgggtgggtgtcagaaccggagaagggccgagcagagccgtttaaa
tttcccgatcgttgtcctgaatgtgactccattgccacgcgggaggaaggcgaagtcgtc
acccgctgcaccggcggcctgatctgcccggcgcaggccgtggaacggctgcgccatttc
gtgtcgcgcaatgccttcgatattgaagggctggggatcgagcgtatccaactgttcttt
gaacagggtcgcatcaagcagcccgccgatatcttcacgctggaggtccgcgaagaacag
cgcctggaccggctgatcagcatgaccggctttggcaagaaatcggtggagaagctgttc
gccgccatcgaggcgcggcggaccatcgcgctggaccggttcatcttcgcgctcggcatc
cgccaaatcggggaggccacagccaagctgttggcaaaggcctatcgcacggcggaaaac
tggcgcgaccgcatggtcgccgccgctgctgaacgggcggacaagcgcgaggagaagaag
ccggaactggtgggcgaggcctatgccgagctttgcgccatcgaacagatcggcatgagc
gtggccgacgacctgaccgatttcttccgcgaacagcataatctggacgccgtcgccgcc
ctgctggcacaggtgaggccagaggagtatgtgccgccggcggcggccaccacgtcgccc
gtcgccggcaagacggtggtcttcaccggcacgctgaccaccatgggccggtcggaagcc
aaggccaaggcagaggccctgggcgccaaggtcgccggatcggtcagcgccaagaccgac
tatgtcatcgtcggcgccgatgccgggtcgaaggccgccaaggcccaggaactgggcgtg
accattctctcggaggaggaatgggcggcgttgattgcaggataa

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