Notothenia coriiceps (black rockcod): 104940897
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Entry
104940897 CDS
T04920
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00514
Other types of O-glycan biosynthesis
ncc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104940897
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104940897
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104940897
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104940897
Glycosyltransferases [BR:
ncc01003
]
Glycan extension
O-Glycan
104940897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
104940897
NCBI-ProteinID:
XP_010764211
UniProt:
A0A6I9MR04
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MKEAVQSVTMWKPGAGSRSSVNPAAVTAVSCLLVTGMLVLSVGHPGSGDPMEPGAATTSG
KVFSAYFRKLTRERRAISPPPRRSVPSGPVEPLSPEDLFIAVKTTGRYHRQRLELLLDTW
ISRNMQQTFVFTDGEDEELRKRMGDHLINTNCSAAHNRQALSCKMALEYDTFINSAKKWF
CHVDDDNYVNVGSLLKLLSQFSHSQDVYLGRPSLERPIEATEKLGTAEMKQVSFWFATGG
AGFCLSRGLALKMKPWASEGSFMATADHIRLPDDCTVGYIVEALLGVRLLRSALFHSHLE
NLGLVSDIHNQVTLSYGTVENSRNTVNVNGLFSINEDPTRFRSVHCLLYPDTAWCPRPR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagccgtccaaagtgtaacaatgtggaaacccggagccggatccagaagctcc
gtgaatcccgctgctgtcaccgcggtgtcctgcctgctggtgactgggatgctggtgctt
tcggtcggacacccgggcagtggagacccgatggagcctggggctgcaacgacgagcggg
aaagttttctcggcgtatttcaggaaacttacccgggagaggagagctataagcccacct
ccgaggagaagcgttccctccgggccggtggagcctctctccccggaggacctgttcata
gcggtgaaaaccaccgggaggtatcaccggcagagactggagctgctgcttgacacctgg
atctccagaaacatgcaacagacgtttgtgttcactgatggagaggacgaggagctgagg
aagaggatgggagatcacctgatcaacaccaactgctccgcggcccacaatcgccaggct
ctctcctgtaaaatggctctggaatacgacactttcatcaactctgccaagaagtggttc
tgtcacgtggacgatgataactacgtgaacgtgggctccctgctgaagctcttgtctcag
ttcagtcactctcaggacgtttacctgggccggcccagcctggagcgacccatcgaggcc
acggagaagctcggcaccgctgaaatgaagcaggtgagtttctggttcgccaccggagga
gcgggattctgtctgagccgcggcctcgctctcaagatgaaaccctgggcgagtgagggc
tccttcatggcgacggcagatcacatccgcctccctgacgactgcacggtgggctacatc
gtggaggcgctgctgggggtccgcctgctccgctcagcgctgttccactctcacctggag
aacctggggctggtgtcagacatacacaaccaggtgactctcagctacggcacagtggaa
aacagcagaaacacagtcaatgtgaacggactgttttcaataaatgaagatcctacaagg
ttcaggtcggtccattgtctgctgtacccagacactgcttggtgcccccgcccccggtga
DBGET
integrated database retrieval system
