KEGG   Notothenia coriiceps (black rockcod): 104940908
Entry
104940908         CDS       T04920                                 
Name
(RefSeq) lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    104940908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncc03000]
    104940908
   04121 Ubiquitin system [BR:ncc04121]
    104940908
   03036 Chromosome and associated proteins [BR:ncc03036]
    104940908
Enzymes [BR:ncc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     104940908
Transcription factors [BR:ncc03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    104940908
Ubiquitin system [BR:ncc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     104940908
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104940908
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     104940908
SSDB
Motif
Pfam: Adaptin_N PHD_4 zf-CXXC F-box-like F-box LRR_4
Other DBs
NCBI-GeneID: 104940908
NCBI-ProteinID: XP_010764224
UniProt: A0A6I9MBS7
LinkDB
Position
Unknown
AA seq 764 aa
MALSLSGDDEEYDSESEQQRAANRPKPKVGTSAAAIKLPSNRSSSGARRRRTRCRKCEAC
VRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCKEAGKEDTLEEEEE
KFNFMLMECSICNEIVHPNCLKVNERRAALGAVSLTRGSRMLTGSQKLIVHDDLKEMLDS
NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLA
LLSISTFQRGLKEKSDDPYYSKLLHHIKTEEEDEDPYEEEDEEGRVPHFRGGVERRGRFG
DPEDEADERDSRSALLNPSVKTPFGDSDQSLCSSPQAGPSSEGGSETQEKGPRRKARRKR
RVPNRELSRELSKALNQEIQKTEDCLANENRQPLKVEPQTENEEPQRLFRNELGDQRPHL
KNKEMNGTPWELRHFYPSQITPLGFNRSTPTNRPVPPHSPPKCVQMERHVIRPPPISPPP
DRLPLKDGKSHVIQREVWMKIFGYLTHQELCVCMRVCKTWNRWCCDKRLWTMIDLNRCTS
ITPLMLSGIIRRQPGSLDLSWTNISKKQLGWLINRLPGLRVLKLSGCSWAAVSALCTSSC
PLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNVEDLRLAGLDITDASLRL
ISRQMPSLSMLDLSYCNHINDQSVNLLTAAGTTTRDSLTDINLSVCNRVTDHSLNFFKRC
GSICQIDLRFCKQVTRTACERFIAEMSVSVPFRLKEDKLLQKAS
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggccttgtcactgagcggagacgatgaggaatatgattcagagtctgagcagcagcgg
gcggccaaccggccgaagccgaaggttgggacgtcggcggcggccatcaagctgccgtcc
aatcgcagctcgtcgggagcgagacgcaggaggacgcgatgccggaagtgcgaggcgtgc
gtccggaccgagtgtggagagtgtcacttctgcaaagacatgaagaagttcggagggccg
gggcgcatgaagcagtcctgcatcatgaggcagtgcattgcaccggtgctgcctcacacg
gcggtgtgtgtggtgtgtaaggaggccgggaaagaggacacactggaggaagaggaggaa
aagttcaacttcatgctgatggagtgctccatctgcaacgagatcgtccatcccaactgc
ctgaaggtaaacgaaaggagagcagcgctgggagcagtgtctctgacaagggggagtcgc
atgttaactgggtcacagaaactcatagtacacgacgacctgaaggagatgttggacagc
aacaaagactcgctgaagctggaggcgatgaagcgcatcgtggctatgatcgcacgtgga
aaaaatgcatctgatctcttccctgctgtggtgaaaaatgtggcctgtaaaaacattgag
gtgaagaagctggtgtatgtttacttggtgcgttacgcagaggagcagcaggacctcgct
ctgctctccatctccaccttccagagggggttaaaggaaaagtcagatgatccttattac
tccaaactcctacatcatataaagacagaagaggaggacgaagacccctatgaggaggag
gatgaagaaggcagggtgcctcacttcaggggaggtgtagaaaggagagggcgttttggg
gaccctgaagacgaagcagatgagagggactccaggagtgcactcttgaacccctccgtt
aaaactccttttggagacagtgaccagtcgctctgcagctccccgcaggccggccccagc
agcgagggcggcagtgagacccaggaaaagggtccgcgtcgcaaagcccgccggaagcgc
cgtgtacccaacagagagctgagccgggagctgagcaaagccctgaaccaggagatccag
aagacggaggactgcctggccaacgagaaccggcagcccctcaaggtggagccgcagacg
gagaacgaggaaccccagaggctgttccgcaacgagctgggggatcagaggccccacctc
aagaacaaagagatgaacgggaccccctgggagctgcgccacttctaccccagtcagatc
accccgctgggcttcaacaggagcacccccaccaaccggcccgtgcccccacactccccg
cccaagtgtgtccagatggagcggcacgtgattcggccgcccccgataagcccgcccccc
gacagactgccgctgaaagacgggaaatcccacgtcattcagcgagaggtgtggatgaag
atcttcggatacctcacccaccaggagctgtgcgtctgcatgagggtctgcaagacgtgg
aaccgatggtgttgtgataagagactctggacgatgatcgacctgaaccgctgcacctcc
atcacgcctctcatgctgagtgggattatccgccggcagccgggctccctggacctcagc
tggaccaacatctccaagaaacaattgggctggcttataaacagattgccaggtcttcgg
gtgttaaagttgtcggggtgttcctgggcggcggtctctgcgctctgcacctccagctgc
cctctgctgcgcaccctggacgtccagtgggtagaggggctcaaagacgctcagatgagg
gacctcctctctccccccacagacaacagaccaggtcagctggataaccgctgcaagctg
cggaacgtggaggacctgcgcctggcggggctggacatcaccgacgcgtctctacgcctc
atcagccggcagatgccctctctctccatgctggacctgagctactgtaaccacatcaac
gaccagtcggtcaacctgctgaccgccgccgggaccaccaccagggactccctaacagac
atcaacctgtcagtttgtaaccgggtcacagaccattccctgaactttttcaagcgctgc
ggcagcatctgtcagatcgacctgcgcttctgcaagcaggtgacgaggacggcctgcgag
cgcttcatcgcagaaatgtcagtgagcgtgccgttcagactgaaagaggacaaactgctg
cagaaggccagctag

DBGET integrated database retrieval system