Notothenia coriiceps (black rockcod): 104942111
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Entry
104942111 CDS
T04920
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104942111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ncc04050
]
104942111
Cytokine receptors [BR:
ncc04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
104942111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Death_TNFRSF11B
Motif
Other DBs
NCBI-GeneID:
104942111
NCBI-ProteinID:
XP_010765612
UniProt:
A0A6I9MMB7
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MSARIAKSNPAMKLIVLFTASFSWAFQQQDILPKYQYLDPVTSDLLLCDQCPPGTAVKRH
CTTDTPTECQVCPERHFAENWHWGDTCQYCTSVCKERQLVKQQCNSTHDQLCECAPGFHL
VVEFCITHSSCPPGYGVTALGTPVSETTCERCPAGHFSSRDSSTEPCLPHKNCSGLGLKT
LRWGTSTSNSLCTNKTASPECSQQHSLCQTASGVNLCEKKVSRCNSLKNLTLEDLLKVTD
SLPGVKVKLEDVRAVVSTCLPQQYILQLLHLWKMANYDLDLAKGLSHSLRVLRNNGAPRH
LLKGLKKFSRIIGTTSTHKMYEKMFVSMLHDESCFKAHKPLNE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacggatagcgaaatccaacccggccatgaaactgatagtgcttttcacagca
tctttctcctgggcctttcagcagcaggacatactgccaaagtaccagtacctcgaccct
gtgacctctgacctcctgctgtgcgaccagtgccctcctggcaccgctgtgaagcgacac
tgcaccaccgacacacccacagagtgccaggtctgtcctgagaggcattttgctgaaaac
tggcactggggggacacctgccaatactgcacctcggtgtgcaaggagcgacagcttgtg
aagcagcagtgcaacagcacccacgaccagctttgtgagtgtgctccaggtttccacctt
gtggtggagttctgcattacacacagctcctgtccacccggatacggagttacagcttta
ggtacaccggtgagtgaaaccacgtgtgaacgttgtcccgcgggtcatttctcaagcagg
gactcctctaccgagccatgtctgccccacaaaaactgctccggtttgggcttaaaaaca
ctgagatggggcacgtctacttcgaacagcctctgtacaaacaaaacggcttctccggag
tgctctcagcaacattctttgtgccaaactgcttcaggtgtcaacctctgtgagaagaaa
gtctcccgctgcaacagcctaaaaaacctaaccctagaggacctcctgaaggtcaccgac
agcctgccaggggtcaaagttaagctggaggatgtccgggccgtggtctccacttgtctg
ccccagcagtacatcctgcagctgcttcacctctggaagatggcaaactatgacctggat
cttgccaaaggtctgtctcacagtctgagggtgctgcgcaacaacggggccccacgccat
ctgctgaaaggcctgaagaagtttagccgcatcataggaaccacctccacgcacaagatg
tatgagaagatgtttgttagtatgcttcacgatgagtcctgttttaaggctcataaacca
ttaaatgaataa
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