Notothenia coriiceps (black rockcod): 104948864
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Entry
104948864 CDS
T04920
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104948864
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104948864
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
104948864
NCBI-ProteinID:
XP_010773399
UniProt:
A0A6I9N655
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MRDTGEGGGENKIGKSEKDQSWIPKIIKKRVCTTFVEDSLSNGARCQCGGARDDHGSVAL
GDYFSTAIVNRWVSAQHSSEYPTDAFGELQFAGASKRHSYYLRLSWDTQASMVYTLMTAH
WGLSPPNLVVSIVGGEGRTKVKTWVREVLRQGLVKASQSTGAWILTAGLREGVGRCVGEA
VRDHATAASSVSLNKVVALGIAPWGFVHNREQLVNPQGSFPAKYYVQNTSRDSCCLDNNY
QAFLLVDDGSVERRQETGFRAKLEDYISHQRTGIWGSGSIDIPVLCMLISGEASKLERVD
LSLKTSMPWLVLAGSGGLADFLSDVLENLSSAPTAQSSSEGDGEAGPSVDLKDRVAERVK
KHFPSEAETEKLVERALSIYQNRHLITIYHGEQESPNEFDTVLLKALVGASKHRASVDDS
PYNEELKLAVTWNRVDIAKSELFNGDIHWRYEDLEDSMTDALVNDKPQFVRLFTENGLNI
LDYLTYGRLENLYRSVADGTVLYYLLQRHLVERLGYAAPAPTLNLQDSTKGAAENVYSGR
VTDISLFEVARVLELLMGDVCQPFYYEALGLEQISSKRRALRRASKVLRGDCLYRDKRCL
FPWASLFIWSVLQNRSEMSTFFWEMAGESVLSALSGCKILREMSKLEAEAETKLSMKELA
QRFENLAHDVFSSCYRSDESRSFTLLIRKSPVWGGTTCLQMGMGADARLFFSHDGVQSLM
SQIWWGDMKRSTEVWKLLLAFFCPFLCYTNLIPFRKQNDPHQEDEGKPSDDGPGRDSDSL
YGATVFSFSDIKHIEADTQGSHTPRTATIKGIPQTRRPPKRPFIVSRWRQFWFAPVTAFL
GNVIMYFLFLLLFSYVLLVDFLPPPPAGPAITEYVLYFWVFTIVCEEFRETFFLGTMKTL
RQKIRVYIQDVWNKCDLVAIVLFIVGVILRMFDWSYELGRDILCVDYMVFTLRLIHIFAI
HRQMGPKIIIVGKMMKDIFFFLFFLMVWLMAYGVANQALLYSYDPSLERIFRRVFYRPYL
HIFGQIPVEEMDVGKAWDMPCTHNVTLIKMGDEPCRTTSSNWLVVILLIVYLLVTNILLI
NLLIAMFSHTFSEVQGNSDIYWKFQRYNLIVQYHSRPSLAPPFIILSHINLFIKRVIRRV
PSIKIYHFVLQLKGKAANRLMTWETIQKEDFLTAQNKIQKSSDSERLKQMSVKVDGVLKH
MSEGRDFDHRLRALENEMEYCSSALSWIVDTLAQGSTFKPPRPPPTTREAFPSSSHTA
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgagagacacaggagaaggaggaggcgaaaataaaatcggcaaatctgagaaggaccag
agttggatccccaagatcatcaagaagagagtgtgcaccacctttgtagaagattctctc
agtaatggcgcgcggtgtcagtgcgggggtgcgagagatgatcacggctctgtggctctt
ggagactacttcagcacagcgattgtcaatcgctgggtcagcgcccagcactcctctgaa
tatcccactgatgcctttggggagttgcagtttgcaggagccagcaagaggcacagctat
tacctgcgtctgtcatgggacacccaagcgtctatggtctacaccctgatgacggctcac
tggggtctttctcctcctaacctggtggtctctatagtgggtggagaaggcaggacaaag
gtgaagacttgggtacgagaagtcctccggcagggactggtgaaagcctcacaaagcaca
ggagcgtggatcctgacggccggcctgcgtgaaggcgtgggcagatgtgttggagaggcg
gtgagggatcatgccaccgcagcctcgtctgtgtccctcaacaaggtggtggcgctgggt
atcgctccctggggcttcgtccacaaccgagagcagctggtcaaccctcagggcagcttt
cccgctaagtactacgtccagaacacgtcccgggactcctgttgcctggacaacaactac
caggccttcctgctggtggacgacgggagtgttgagcgcaggcaagagactggattcaga
gccaaactggaggactacatctcccatcagcgcacaggcatctggggcagcggcagcatc
gacatcccagtcctatgtatgctgatatcaggggaggcaagcaagctggagagagtggac
ctctctctgaagacctccatgccctggctggtgctggctggctctggagggctggctgac
ttcctgagcgacgtcctggagaacctgtcctctgcccccaccgcccagtcctcctcagag
ggggacggcgaggcggggcccagcgtggatctgaaagacagagtggcagaacgggttaag
aagcacttcccctctgaagcggagacggagaaactagtcgagcgggctctgagcatctac
caaaacagacacttaattacaatctaccatggagagcaggagagccccaatgaatttgac
actgtcctgctcaaggcactggtgggagccagtaagcatcgagcgtctgttgatgacagt
ccttacaatgaagagctgaagctagcggtcacatggaacagggtcgacatcgccaagagt
gagctcttcaatggagacatccattggaggtatgaagacttggaagactccatgacagac
gccctggtcaacgacaagcctcagtttgtgcgcctcttcacggagaatggcctcaacatt
ctggactacctgacgtatggccggctggagaacctctaccgctccgtggccgacgggact
gtgctttactatctgcttcagcgccatctagtggagcggctggggtatgcagcccctgca
cccacattaaacctgcaggactccactaaaggtgcagcagagaacgtatacagtggcaga
gtgacggatatcagcctttttgaggttgcaagggtcctggaactgttgatgggtgatgtc
tgccagccgttttactacgaagccttgggattggaacagatctcatccaagaggagagct
cttaggcgggccagtaaggtgctgcgaggagactgcttgtatcgggacaagcgctgtctc
ttcccctgggcttcgctgttcatctggtctgtcctacagaaccgcagcgagatgtccaca
ttcttctgggagatggcaggggagtcggtgctgagtgctctgagtggctgtaagatcctg
agggaaatgtccaagctggaggccgaggctgagaccaaactgtccatgaaagagctggcc
cagaggtttgagaacctggcacacgacgtcttcagctcttgctatcggagcgatgagagt
cgctccttcacgctgctgattaggaaatctccagtttgggggggcaccacctgcttacag
atgggcatgggcgctgatgcacgacttttcttcagccatgacggagtgcagtctctgatg
tctcagatctggtggggtgacatgaagaggagcacagaggtgtggaagctcctgctcgcc
ttcttctgccccttcctctgctacaccaacctcatccccttcaggaaacagaatgacccg
caccaggaggacgaggggaagcctagcgatgacggaccgggccgggacagcgacagcctc
tatggcgccaccgtcttctctttctcagacatcaagcacattgaagctgacacgcaagga
tcacacactccaaggaccgcaaccatcaaaggcataccccagactcgcagacctccaaag
cgtccgttcatcgtgtcaagatggcgtcagttctggttcgctcctgtcaccgcattcttg
ggcaatgttatcatgtacttcctgttcctcctgctcttttcctacgtgctgctggtggac
tttctgcccccgcctcccgctggtccagccatcactgagtatgtgttgtacttctgggta
ttcaccatcgtgtgtgaggagttccgagagacgttctttttggggacaatgaagactctg
cgtcagaagatcagagtgtacattcaggatgtgtggaacaagtgtgacctcgtcgccatc
gtgctcttcatcgtaggagtaatcctcaggatgttcgactggtcctatgagttaggccgc
gacatcctgtgcgtggactacatggtcttcactctgcgtctcattcacatctttgccatt
cacagacagatgggaccaaagatcatcattgttggcaagatgatgaaggacatcttcttc
ttcctgttcttcctcatggtgtggctcatggcatacggagtagccaatcaggctttgctg
tactcctacgaccccagcttggagcgcatctttcgccgggttttctacaggccgtacttg
cacatctttggacagattcctgtggaagagatggatgtggggaaggcctgggacatgcct
tgcacacacaacgtgacattgattaagatgggcgacgagccctgcaggacgacgtctagc
aactggctggtcgttattctgctgattgtttatctactggtcaccaacatcctgctcatc
aacctgctcatcgccatgttcagccacaccttctctgaagtgcagggtaacagtgacatc
tactggaagttccagcgctacaacctgatcgttcagtaccactcccgtccttccctggct
cctccgttcatcatcctctctcacatcaatctctttatcaagagggtaatccgcagggtg
ccttccatcaagatctaccactttgtattgcagttaaaagggaaagcagccaacaggctc
atgacgtgggaaaccattcagaaggaggacttcctgaccgcccagaacaagatccagaag
agcagtgacagtgagaggctcaaacagatgtctgtcaaagtggatggtgtacttaaacac
atgagtgaaggcagagacttcgaccacaggctgagggctctggagaatgagatggagtac
tgctcgagtgctctcagctggattgtggatactttggcacaaggcagcacgttcaaacct
cctcggcctcctcctacaacaagagaggcgttcccctcctcttcccacactgcctga
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