Notothenia coriiceps (black rockcod): 104949008
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Entry
104949008 CDS
T04920
Name
(RefSeq) msx2-interacting protein-like isoform X1
KO
K25100
Msx2-interacting protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104949008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104949008
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104949008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
104949008
NCBI-ProteinID:
XP_010773585
UniProt:
A0A6I9NGJ7
LinkDB
All DBs
Position
Unknown
AA seq
3246 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDSSPSSSRDVTGFSRATVGPVFGPPVSL
HTREGRYERRIDGSSETRERAYDHSPYGHHERSGTFDRQRHYNADYYRDRTMFAAAGPGS
SAIGGSFEAADPHFDSRIRDPFTLTNSSRRELYRDERGRRVDRTYHHRRSRSSHSSQSRH
PSPQRTTGQTPKTPHSPKRAPLSPGRGPRSRSHSRSSSSDSVSSTSSTGSGSDSNSSSSD
GSRARSVQSSATHAPTQSSMGLDSDEPRRSFGIKVQNLPVRSTDTSLKDGLFHEFKKHGK
VTSVQIHGASEDRYGLVFFRQQEDQEKALTVSKGKLFFGMLIEVIAWNGPETESENEFRP
LDGRIDEFHPKATRTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDIKKVNGVPQYAFVQYS
DIASVCKAIKKMDGEYLGSNRLKLGFGKSMPTTCVWLDGLATSVTEQYLTRHFCRYGHVV
KVVFDRLKGMALILYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFYRTMQTSGQ
DIRDFYEIPTERREERRPPYHEFTAERAYFENIRTPGIYPEEARRDYAARSRERFPELEH
FQGEHFDPRFHEDPRDFRDFRDPFEQDIRKYTYIQRERERERERFEADRSRWSPSHPRRP
ITPTVSPSPSERAPRDSERRVYSQSSERSGSVSSMSPPHFDKSEKALLEHASKSDKSDKS
SQPELVASAEKTKRTKRKEKGDKDKAEKVKSRKTKGQSPSNLLPETELETGFDGASGRGR
GSDQDGHERNKCKGEAEPLPGNQLSTALDSVKSDRSENSKGENSDLDGKNRLKKHLKPDI
GNDGKDVSVDSDRLEARKRRFADSGGRTIRQKRSRHEEEDAIPSSDFGGAGALMKEIDTD
KNKDSQRKDSRLKSDKSSTQKDGQEDLRAQREKSESLDPRHPGHISSRRFSHEGITDQSS
IREHEHHAAFTCVAQNADTEKSVKNKEDHVDIDLSQSYRKQMEQNRRLHQQQQQRESDKS
DKPGSPQEAEDLEHRSLVHEVGKPPEDVTDTFPSHKLKKIDLLETDSGMKRERVYRRIRQ
KSEDRDWNNISPPGHQHFSHHADEEFLDPSQKELSRNEEKLHPDLELLVKRTHSTQVNKP
NTPLLSVEEEQQKRWESRVKQDLLPDLNFSRVLGKNIHNRKRLEYGMWHDLEPGEVRSDS
EEDREAKPHSPVPSTSVPFSERPRVDRFSDPKLASLERNKFYSFALDQTITPDTKALLER
AKSLSSSREDNWSFLDYDSHFAGLRNRKDTEKVESAPRPTPSWYMKKKKIRSGSEDKLDE
RKEEPKPEEQERRELFASRFLHSPVFELDTRRLQHLERKHEEPEHVNLQPGQQGDGELET
GPVVLFHSRFLELTRLQQQKNKPHPLPEAKEVSIITSEKVEKTPVQDQQAVQSPETIESI
MEPEIKPISPAEETIPEPRLTLTSVAQSVVKDLPPPEETFVALHPAPDPYTPVSVIKEEM
KVEVKEIEPTVPMHHQLTEGLSDAEPAPVVAPEPIYSMDKCKASQSVEKCDNISDLKPLS
IEKPSCRDSNDELVSISEAELDPQTTQPEVPEATSPIPHSLVEEEKETNAIWKTEAEPEG
EEENPQVIKLQMPIDETNDEPVSPQKEYKTKEMKNKKLKHSPAQVAPVPVVSNYGSEKPL
TRKSERIDKEKLKRGSSPRAESKSTGKSPIHGSESDMSEPGISAGRARRRNVKSVYATPV
EDDGSVRPGKEIPDSPRSARKRGSDKDATQQQNMEQDPPAPAPTKRGRPPKNRKQVDESS
ACKVEKSKLDNKDTDSNESEGGERIPRVSKGKTSPHGTKDSWNPMSTVQGSGLPRKVRKS
DATEDDQEMDFTDEDSLTLQDSSSSFKEDPPIQVEKKEEKDKQGRELGRDKDDFLDEASE
GKSNGKESDSPVLEEKSASEKDKIVRGKTKLTRTPKSPVLKNLKIRLNVTEVKDLLQLGD
DELGSQEDSSKKLRPGDPSDPVSKCTSADQEGPNDEEKDISAEENQELLESPKHVISQEL
ELEQAVENIAKLTDPTFPTEQPTPPIPPTEVKSEPEEEKPYPASETELMAAIDSITAEDG
SVISSQAPPPSADVVSEPEIQNAMPSAKDDEPATTNTPAIKEEPVFPTTPKKGPKGRPKT
PKRYKGQKQVRRDFKEGPSISEELTTPLAESPPSCVKTVLTSTPSAATTTVITPTTWKPE
PEPEPLAVKATDVNKDIEAPSEEQIQHLKSVNPQSKSPILPKPQQVPAECTTPSLSPLAN
RPHIRPIQTNRIPVSPPDWRHQSKDTVSVSPFMPLSSKENQSLPSDSDNMIIDHGTSDLR
QILMKHKNLSLPGSSSIPGNLPTLRDQNPSESNTPSAVVPNKSPLPSSLMVAHPAPPIVR
PPALLPSPESKSVISVIASTATSVISRVCNPPESDDKVNINIGNPCVDMTLPKPTYRPNK
DDSGSYHGPVADEVGSATRFIVESPTLGAGSCPGLRVNTSEGVVVLSHSGQKIEGPQRIS
AKISQIPQATAGDMESQQLVSMPQIKQEMYGHSHLGLQKGPSSQTDHGHPGKMQSTSIKQ
ESTGLEKMESSYQPGPQGVVKRLPQGNQQVMSYHQEYMPIKHQKKMDSADPHSTDGAKPS
WTSAISPAISPHLPSPPGNHVGFVTAAGDRAPSHISGVKQEPRSPRKSGHPHSPFTKVSS
PIGSSSPKGIPGMLSTGLPAMQQFISGVHHQEQSVIMQPHSVQGGLGRMSPHRVAQSIPV
GHLVQGDVRVNTPPLSVMSYGMHSEPLASPWSGSMQPRPTSPQTVGRDKVLKVNPASLRG
HEGEQEEARRFHQAQARQSAAQLKPETMQSDPRGRSVQLETYMAQRDMRVLLHQQGERLA
TDPHSGHIQEILPPSSAPSNLSLSLSPRAHVLSKGVSEKDITKQLEAKRPHSPLPKDGLM
GIRQSGQAMASPQRAQLMPPGPSGSFPEYSGMYSNRGGIHSQIPETSPVGLNQPPLNVTP
TMGADLQTKPDGKMTQPVNMLQLLTKYPIVWQGLLALKNDTAAVQLHFVCGNKALAHRSL
PLQEGGALLRIVQRMRLEASQLESVARRMTGDSDFCLLLALPCGRDQDDVLNQTQALKAA
FINYLQAKLAAGIINIPNPGSNQPAYVLQIFPPCEFSESHLSQLAPDLLNRISSISPHLM
IVITSV
NT seq
9741 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctttgggtgggaaatttacccgaacatgttcgagaggag
aagatcgtggagcattttaaacggtatggccgtgtggaaagtgttaaagttctgcggaag
cgagggtcagagggcggtgttgcagcctttgtggattttgtggatattaaaagtgcgcag
aaagctcacaatgctgtcaacaagatgggagaccgggaccttcgaactgactacaatgaa
ccggggtcagtccctagtgctgttcgaggccttgaagacagctccccctcgagcagtcga
gacgttacaggattctctagggcaacagttggtccagtgtttggcccacctgtgtccctg
cacaccagagaaggacgttatgaacggagaatagatggtagctcagaaacccgtgaacgt
gcatatgatcacagcccatatggacaccatgagcgcagtggcactttcgacagacagcgc
cactacaacgctgattattacagagatcgtaccatgtttgctgctgctggccctggaagt
agtgccattgggggaagctttgaggcagcagacccacattttgactctagaattcgagac
ccatttactcttactaattcttcacggcgtgaactatacagagatgagagaggacggcgg
gttgatagaacctaccatcaccggaggagccgatcatctcattcctcacagtcgaggcac
ccttctccacaacggaccacgggacaaacccctaaaactcctcattcccctaaaagagct
cctttgtcccctgggagaggtccgcgatctcgatcccacagcaggtcgtcgagctctgat
tctgtcagcagcaccagcagcactggcagtggcagtgactcaaacagcagctcaagtgat
ggatctcgggcacgttctgttcagtcgtcagctactcacgcccctactcagtcttctatg
gggctcgactcggatgagccacgcagaagctttgggattaaagtgcaaaacctaccagta
cgctccacagacacaagtttaaaagatggacttttccatgaattcaagaaacatgggaaa
gtgacgtcagtgcagatacatggagcgtcagaagaccgctatggtttggtgttttttcga
cagcaagaggatcaagagaaagccctcactgtctccaaaggaaagctgttctttggcatg
cttattgaagtcatagcctggaatggtcctgaaacagagagtgaaaacgagttccggccc
ttggatggtcggatagatgagtttcacccaaaggccacaaggacactgtttataggcaac
cttgagaagactactagttatcaacaactccttgacatttttcaacgctttggagaaatt
gtggacattgacatcaagaaagtaaatggtgttccccagtatgcctttgtgcaatactct
gatattgccagtgtctgcaaggccattaagaagatggatggagagtatctggggagcaac
agactaaagcttgggtttgggaagagtatgcctacaacgtgtgtctggctagatggtttg
gcaaccagcgttacagagcagtacctcacacggcatttctgccgctatggacatgttgta
aaggttgtgtttgatagattaaaagggatggccctcatcttgtacaacaacacagatttc
gctcaggcagctgtaagggagaccaaaggctggaagattgggggcaataaaataaaggtg
gattttgcaagtcaagagagtcagatggccttctaccgaactatgcagacatctggtcaa
gacattagagacttctacgaaattcctactgaacgacgagaggaacggagacctccatac
catgaatttacagcagaaagggcttactttgagaatatacggacacctggcatctatcct
gaagaagctcgaagagactacgctgctcgcagcagggaacgttttcctgaactggaacac
tttcagggggaacactttgacccacgttttcatgaagacccaagagacttccgggacttc
agagacccctttgagcaagacattcgaaaatacacatatattcaaagagagcgagaaaga
gagcgagagcggtttgaggctgatcgtagcaggtggagcccttcccatccaaggcgacct
attactcctacagtatcaccatcaccctctgagcgagctcccagagactcagaaagacgc
gtttacagccaatcttcagagagaagtggtagtgtgagctcaatgtcaccaccacacttt
gataaatctgaaaaggccctgcttgaacatgcatccaagagtgacaagagtgacaaaagc
agccaaccagagcttgtggcaagtgcagagaaaactaaacgtacaaaacgaaaagagaaa
ggggacaaagacaaagctgagaaggttaaatccaggaaaacaaaggggcaatccccatcc
aacctactaccggaaaccgagcttgagactggttttgatggagcgtctggaagaggaagg
ggatcagaccaggatggtcatgagaggaataaatgcaagggggaagctgaacccttacct
ggcaatcagttgtcaactgctcttgactctgtaaaaagtgacagatctgaaaatagtaaa
ggtgagaactcagacttggatggaaaaaatcgtctcaagaaacatctaaagcctgatatt
ggaaatgatgggaaagatgtatccgttgactcggatcgccttgaggcaagaaaaaggcgc
tttgctgattcaggtggcaggaccattcgtcagaaaagaagcaggcatgaagaggaggac
gccattccatcttcagattttggtggtgctggtgctcttatgaaagagattgacactgac
aaaaacaaagattcacaacggaaagattcaagactcaaaagtgataaaagtagcactcag
aaagatggtcaagaggaccttagagcacaaagggagaagtctgagtctctggacccacga
catccagggcacatttcatctagaaggttttcacacgaggggattacagatcaaagcagt
ataagagaacacgaacaccatgctgctttcacatgtgttgctcagaatgctgacactgag
aaaagtgttaagaacaaggaagaccatgttgacattgacctctctcagagttatcgcaag
caaatggagcaaaacaggcgactgcaccagcagcaacagcagcgtgaatccgacaagtct
gacaaaccaggaagtcctcaagaagcagaggacttggaacatcgcagtcttgtgcatgaa
gttggcaaaccacctgaggatgtaacggatacttttccatctcacaaattaaagaaaata
gaccttttagagactgactccggaatgaagagggagcgtgtctacaggagaattagacaa
aaaagtgaagatcgtgactggaacaacatctctcctccaggacatcagcacttctctcac
catgcagatgaagagtttttggacccttctcagaaagagttgagtagaaatgaggaaaaa
cttcacccagatctggagctgttggtcaaaaggacacatagcacacaggtaaacaagcca
aacactcctttacttagtgtggaagaagagcaacagaagagatgggagagcagagttaaa
caagacttgttacctgacctaaacttttctagagttcttggtaaaaatattcacaatcgc
aagcgtttggaatatggtatgtggcatgaccttgagcctggggaagttcgatctgactct
gaagaggacagagaagccaaaccccactctccagtgccctccacatcagtgcctttttct
gaaaggccaagggttgatcgattttcagaccccaagctagcaagtcttgaaaggaacaaa
ttctactcctttgcacttgatcaaaccatcacaccagatacaaaggctctgctcgaacgt
gcaaaatctctctcatcttcaagagaagataactggtcctttttggattatgattctcac
tttgcaggtttgcgcaacagaaaggatactgagaaggtggaatcggcaccacgtcctaca
ccctcctggtacatgaaaaagaaaaagattcgcagtggatctgaagacaaacttgatgag
cgcaaggaggagcccaagccggaagaacaggaacgtagggagctttttgcctcccgcttt
cttcacagccccgtgtttgagctggacactaggcgacttcaacacttggaacgcaaacat
gaagaacctgagcatgtaaacctgcaacctggacagcaaggtgatggtgaacttgaaact
gggccagttgtccttttccatagtcgttttttggaacttacacgacttcaacaacagaag
aataaaccccatccgttaccagaggcaaaagaagtctcaataatcactagtgagaaagtg
gaaaaaacacctgttcaagatcaacaagcagtgcagtctcctgaaacaatagaatccatc
atggagccagaaatcaaaccaatcagtcctgctgaagagacaattcctgaaccccgactc
acacttacttctgtcgcccaatctgtggtcaaggaccttcctccaccggaagagacattt
gttgcattacatccagcccccgatccatatacccccgtatctgtcataaaggaagagatg
aaagtagaggtcaaagagattgaacctactgtacctatgcaccatcaattaactgagggc
ttatctgatgctgaacctgcaccagttgtagcacctgaacccatttactcaatggataaa
tgtaaagcttctcaatctgtagagaaatgtgataatatcagtgatttaaaacctctctct
atagaaaaaccaagctgtcgggattctaatgatgagcttgttagcatttcagaagcagag
ctagatcctcagacaacacaaccagaagtgccagaagcaactagtcccattccacatagt
cttgtagaggaagagaaggagaccaatgctatttggaaaacagaagcagagcctgaggga
gaggaggaaaatcctcaagttattaaactgcagatgcccattgatgagacaaacgacgag
cccgtttcacctcagaaggagtataaaacgaaagaaatgaaaaataaaaagctcaaacat
tcccctgctcaagtggctccagttcctgtggtgtctaactatggttcggagaaaccatta
acacgcaagagtgagcgcattgacaaagagaagctaaaacgaggatcatccccaagggct
gaatcaaagtcaacaggcaagtctccgattcacggatcagaatccgatatgtccgagcct
ggcatatcagcaggcagagcaagacgaagaaatgttaaatctgtgtatgccactccagtt
gaagatgatgggtcagttcgtcctggaaaggaaattccagactcgccacgctctgccaga
aagcgaggttcagacaaagatgcaacacaacaacaaaatatggaacaggatccacctgct
ccggcccctacgaaacggggccgtccgcccaagaatcgcaagcaagtggacgagagttca
gcatgtaaagtagaaaaatctaaattggacaataaagacacggattcaaatgaatcagaa
ggtggggaacgaataccaagagtgtcaaaaggtaaaacctctcctcatggcaccaaggat
tcatggaatccaatgtcgacagttcaaggatctggattaccacggaaagtgaggaaaagt
gacgcgactgaggatgatcaggaaatggatttcacagatgaagattccttgactttgcaa
gattcatcaagttcatttaaagaagatccacccattcaagttgaaaagaaagaagagaaa
gacaaacaagggagagaattaggcagagataaagatgattttcttgatgaggcttctgaa
ggtaaatcaaatgggaaggagtcagattcccctgttttagaagagaaatctgcttcagag
aaagataagattgttagaggaaaaaccaagttgacaagaactcccaagtctcctgttctc
aagaacctcaaaatcagactaaatgtcacggaggtcaaggatcttcttcagttaggggat
gatgaacttgggagtcaagaggattcttcaaaaaagctcagaccaggtgaccccagtgat
cctgtttcaaaatgtactagtgccgaccaagagggccctaacgatgaggaaaaggacatt
tccgctgaggaaaaccaagagctccttgaatcaccaaaacatgtcatctcacaggagctg
gaattggagcaggctgtagagaacattgctaaacttacagatccaacttttccaacagaa
caaccaacgccacctattccacctacagaagtcaaaagtgagccagaggaagaaaaacct
tatcctgctagtgagacagaacttatggcagctattgattcgataactgcagaggatgga
agtgttatctcatcccaagcacctccaccgagtgctgatgtcgtttcagaacctgagata
caaaacgcgatgccctctgccaaggacgatgaacctgcaacaacaaatacacctgccata
aaggaggagcctgtctttcctacaacaccgaaaaaaggtcccaagggaagacctaaaaca
cctaaacgttataaaggacaaaagcaagtaagaagagattttaaggaaggcccttcaata
agtgaggagttgacaactcctttagcagaaagcccaccatcctgtgtaaagactgttctt
acatcaactccatcagcagcaaccacaacggtcatcactcctactacttggaagccagaa
cctgagccagagcctttggcagtcaaagccacagatgtaaacaaagatatagaggcacct
tctgaagaacagattcaacatctcaaatctgttaacccccaatcgaagagtccaatactt
ccaaagccccaacaggtgccagccgagtgcaccaccccttccctgtctccactagctaac
aggccacatatacgacctattcaaacaaatagaattcctgtttctccaccagattggcgc
caccagtctaaagatacagtctccgtctcacccttcatgccgttatcatcaaaggaaaac
cagtctttaccctcagactctgacaacatgattattgatcatggcacaagtgatttgaga
cagattcttatgaaacacaaaaatctttcattgccaggcagtagttctattcctggtaat
ctacccaccctgcgagaccagaatccttctgagagtaatactccatcagctgttgtgcca
aataagtcaccactacctagcagtttaatggtagctcatccagcgccccctatagttcga
cctccagccttactaccatctcctgagtcgaagtctgtgatctctgttattgcatccact
gcaacctctgttatcagtcgcgtctgcaaccctcctgagtccgatgacaaagttaacata
aacattggaaatccctgtgtggatatgactttacccaagccaacttataggcctaacaag
gacgattctggatcataccacgggcctgtggcggatgaggtgggaagtgccacacgattc
attgtcgagagccccactcttggtgcaggatcttgcccaggtctaagagttaatacatct
gaaggagtggtagttttgagccactcgggccagaaaatagagggaccacagagaataagt
gcaaaaataagtcagatcccacaagcaacagccggtgacatggaatctcagcagttggta
tccatgccccagataaaacaagaaatgtatggtcattctcatctaggacttcaaaagggg
ccttcatcacagacagatcatgggcatcctggtaaaatgcagtcgacttctattaaacaa
gaaagcacgggtttggaaaagatggaatcttcttaccaacctggacctcaaggagtagtg
aagcgtctcccacaaggtaaccaacaagtaatgagttaccatcaagaatacatgccaata
aaacatcagaagaaaatggacagtgctgatcctcacagtacggatggagccaaaccatct
tggacctctgctataagtcctgcaataagcccccatttgccctctccgcctggtaaccat
gtaggctttgttactgcggctggtgacagagctccctctcatatcagtggagtcaaacaa
gaaccacgatcccctcgaaagtcaggtcatccccactctccgtttactaaagtgtcctca
cccattggctcctcctcacccaagggcataccagggatgttatccactggccttcctgcc
atgcaacagtttatctcgggtgtacatcatcaagagcagtcggttatcatgcaacctcac
agtgtacaaggaggcttgggacggatgtctcctcaccgtgttgcccagtcaattccagtg
gggcatcttgtccaaggagatgttcgggttaatactccacctctctctgtgatgagctat
gggatgcatagtgagcctcttgcctctccttggtctggatccatgcagccacggccaacg
tcaccacagactgttggcagagacaaggttctcaaggtaaatccagcttcattgaggggt
catgagggggaacaagaagaagccaggcgcttccaccaggctcaagcaagacagtctgct
gcacaattaaaaccagagactatgcagtcagatcctcgtgggcgtagtgtccagttagaa
acatacatggcacaacgagatatgagagtgctcttgcaccaacagggagagcgtttggcc
acagatcctcattctggacacattcaagagattcttcccccctcctcggcgccctccaat
ctgtccttatccttgtctccaagagcacatgttttgtctaaaggtgtgtctgagaaggat
ataacaaagcaattagaggcaaagaggccacactctcctcttcctaaagatggattgatg
gggatcagacaatctgggcaagcaatggcgtctccccagagagctcagctaatgccacca
ggacctagtggctcattccccgagtactcagggatgtactcaaaccgaggaggcatccac
tctcaaataccagagacgtcacctgttggacttaaccagccaccactgaatgtcacacca
accatgggtgctgacctccagacgaaaccagatggcaagatgacgcagcctgttaatatg
ttgcagttgctcacgaaataccctattgtttggcaaggcctgctggcactgaaaaacgac
acagctgcagtccagttgcattttgtctgtggcaacaaagctttggctcatcgatcactg
cccctacaagaaggaggcgcattgcttaggattgtccagagaatgagactagaggcttca
caattggagagtgtagcccgaagaatgacgggggacagcgacttctgtctcctccttgca
ctgccatgcgggcgagaccaagacgacgtcctgaatcaaactcaagctcttaaggctgct
ttcatcaactacctgcaggcaaagttggctgctggtatcatcaatatccccaacccaggc
tccaatcagcctgcctatgtgctgcagattttcccaccatgtgaattctccgagagccac
ctgtcgcagctcgcccccgaccttctcaacaggatctccagcatctcaccacacctcatg
attgtcatcacctctgtgtaa
DBGET
integrated database retrieval system
