Notothenia coriiceps (black rockcod): 104949270
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Entry
104949270 CDS
T04920
Symbol
tmem5
Name
(RefSeq) transmembrane protein 5
KO
K21052
alpha-dystroglycan beta1,4-xylosyltransferase [EC:
2.4.2.61
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00515
Mannose type O-glycan biosynthesis
ncc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
104949270 (tmem5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104949270 (tmem5)
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.61 alpha-dystroglycan beta1,4-xylosyltransferase
104949270 (tmem5)
Glycosyltransferases [BR:
ncc01003
]
Glycan extension
O-Glycan
104949270 (tmem5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RXYLT1_C
RXYLT1_N
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
104949270
NCBI-ProteinID:
XP_010773904
UniProt:
A0A6I9N7E9
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MKIPKRKLFLLIIFAYVAFSLYAAYNVFFSTKVISRVHRVVKKETVSGGVKDGGGAPFLA
RDWNPWEDEQVDYNSALTKKREAFKKHLARIDKNKATRYRVQIWGKAAIGIYLWEHILEG
PLNPTDKVAQWREGELQSGKIDFSFYTGPAVVQGHVPLDMNSLVLVLNGREPQKVSYSTR
WLEHVQALVKSRTVSHVAVVLLGNEHCHNDFIGPYLKRNGGFVDLLFVVYDSPWVNDKDV
FQWPLGVATYRQFPMIRPNAQLITSNRPYLCNFLGTVYKNSSRETLMQVLKKSGLEEECI
TNAREKWLPQETADSLRQYQTALVQSELTLCPVGINSECYRIYEACSYGSVPVVEDVLTP
GSCAAGSSSPLRLLKAAGAPFIFISDWKELAAILERERGMSQEQRVDRRRRLLEWYAGFR
QQMKERFTEVLEENFFKNV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccaaaaagaaaactttttctactaatcatttttgcgtatgtggcattttca
ctgtatgctgcatacaatgtcttcttcagcactaaagtaatctcccgtgttcaccgggtg
gtgaagaaagagacagtctcgggtggtgtcaaagatggcggtggagctccatttctagcg
cgtgattggaatccgtgggaggacgaacaggtggactacaactctgctctgaccaagaag
agggaggccttcaaaaaacacctggcccgcattgacaagaacaaagccacaagatacagg
gtacaaatctggggcaaagctgctataggcatttatctctgggaacatattttagaggga
cccctcaaccctactgacaaggtcgcacaatggagagagggagagttgcagtcaggaaag
atcgatttcagtttctacactggtcctgctgtggtccagggtcatgtccctctggacatg
aacagcctggttctggttctgaatggccgcgaaccgcagaaggtgtcttattccacgcgg
tggctggagcatgtccaagctctggtaaagtcccgaacagtgtcacatgtcgctgtggtc
ctgctgggcaatgagcactgccacaacgacttcattggcccttacttaaagaggaacggt
ggctttgtggacctgctgtttgtagtgtacgacagcccctgggttaacgacaaggatgtg
ttccagtggcctctgggcgtcgccacgtacaggcagtttcctatgatcaggccaaatgcc
caactgattacctctaacaggccatacctctgtaatttcttgggaactgtttacaaaaat
tcctccagggaaactctcatgcaggtgctgaaaaaatctggtctggaagaggaatgcatc
accaatgccagggagaagtggctacctcaggagacagcagacagtctgagacagtatcag
accgctctggtccagagcgagctcacactctgccctgtcggaatcaactcagagtgctac
cgaatctacgaggcctgctcctatggctccgtgcccgtggtggaggatgttctgacacct
gggagctgtgctgccgggtccagctctcctctgcgactgctcaaagctgcaggagccccc
ttcatcttcatcagtgactggaaagaactagctgccatcttagagagggagcgggggatg
agccaggagcagagggtggaccgcaggaggaggctgctggagtggtacgccggctttcgt
cagcagatgaaggagaggttcactgaggtcctagaggagaatttcttcaaaaacgtctga
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