Notothenia coriiceps (black rockcod): 104949971
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Entry
104949971 CDS
T04920
Name
(RefSeq) sodium-dependent noradrenaline transporter-like
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104949971
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104949971
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104949971
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104949971
NCBI-ProteinID:
XP_010774717
UniProt:
A0A6I9NDT3
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Position
Unknown
AA seq
517 aa
AA seq
DB search
MNIQVVPEHKLSSVAPLKQCNVEKREVELILVKDQNGVQYTSSSIIPSPGHLAGPPGATE
EERETWGKKMDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLIPYILFLVIAGMPLFYME
LALGQYNREGAATVWKICPAFKGVGYTVIIIALYVGFYYNVIIAWSLYYLYSSMTRDLPW
LLCGNIWNSLNCTDPKAVNGSLLGNGSYSKYKMTPAAEFYERGVLHLHESRGIQDLGLPR
WELTLCLVVVLFILYFSLWKGVKSSGKVVYITATMPYIVLVVLLIRGITLPGAKDGIKAY
LSIDLKRLNNLEVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDALLTSTVNCVTS
FLSGFAIFSVLGYMAYKHGVNIEDVATEGAGLVFIIYPEAISTLPGSTFWAIVFFIMLLT
LGIDSSMGGMEAVITGLSDDFKFLKRNRKVFTFATAFGTFLVALLCITNGGIYVLTLLDK
YAAGTSILFAVLIEAIGVSWFYGMKLYGTFLPHDFSI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccaggttgtgccagaacacaagctctcatcggtggccccgctgaagcagtgc
aatgtggagaaaagggaggtagaactgatactggtgaaggaccagaatggcgtccagtac
accagttcctccatcatcccctcccctggccacctcgcaggtccccccggagccaccgag
gaggaacgagaaacttggggcaagaaaatggactttctcctgtcggttattggcttcgcg
gtggacctggccaatgtttggagatttccgtatttgtgctacaagaatggaggaggtgcc
tttttgatcccgtacattcttttcctggtcattgcggggatgccattgttctacatggag
cttgccttgggccagtacaacagggaaggggcagctacagtttggaagatttgccctgcc
tttaaaggtgtgggctacactgtgatcatcatagccctgtatgttggcttctactacaat
gtcatcatcgcctggtccctctactacctgtactcctccatgaccagggatctgccgtgg
ctgttatgtggaaacatctggaacagcctgaactgcaccgaccccaaagctgtcaacggg
tccctccttggcaacgggtcctactccaagtacaagatgaccccggcagcagagttttat
gaacggggtgtgctgcatctccacgagagtaggggtatccaggaccttggcctgccccgc
tgggagctgactctgtgtctggtggtggtgctcttcatcctctacttcagcctgtggaaa
ggtgtcaaatcctcagggaaggtggtgtacatcacagctaccatgccctacattgtcctt
gttgtcttgctgatccgaggcataactctacctggagccaaggatggcatcaaggcctac
ctcagcatagacttgaagcggctcaacaatctggaggtgtggattgatgctgccacccag
atattctactcactgggagcaggctttggggtgctcattgcttttgccagttataacaaa
tttgacaacaactgctacagggacgctctcctgaccagcactgtgaactgcgtcactagt
ttcttatcagggtttgccatcttctctgtgctcggatacatggcttataaacatggagtg
aacatagaagatgtggcaacagagggggcaggactggtgtttatcatctaccccgaggcg
atctctactctgcctggctcgacgttttgggctattgtgttcttcataatgctgctgact
ctgggcattgacagctcgatgggcggcatggaggcggtgatcacaggcctgtcggacgat
tttaaattcctcaagaggaacagaaaggtcttcaccttcgccacggcctttggaacgttc
ctggttgctctcctctgcatcaccaatggtgggatctacgtgctgaccctgttagataag
tatgcagcggggacctctatactgtttgctgttctgatcgaggccattggagtgtcatgg
ttttacggtatgaaactctacggtacttttttaccccacgatttctccatttaa
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