Notothenia coriiceps (black rockcod): 104954412
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Entry
104954412 CDS
T04920
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104954412 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncc03310
]
104954412 (nr1h4)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104954412 (nr1h4)
Nuclear receptors [BR:
ncc03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
104954412 (nr1h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Put_Phosphatase
PBP_dimer
Motif
Other DBs
NCBI-GeneID:
104954412
NCBI-ProteinID:
XP_010779816
UniProt:
A0A6I9NZR7
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MAMVQTKSSRDILADQGIPFLQDPDILPFTYPSTQYPSMEPTMSSTPYYSSQNFYPQYNG
DEWYSHAGIYELRKGPLEVGYDAEMEEVTAVVPAMCKRTRHMSQAGRVKGEELCVVCGDK
ASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCEMDMYMRRKCQECRLRKCKEMGML
AELKPSSSLAGLLTEIQCKSKRLRKNTKTSPGQSTGDETEAADNTDNKQVTSTTKLPKEK
VEITKEQRALIKAILDAYNRHQIPQDVTKKLLQEQYSAEENFLLLTEVATSQVQVLVEFT
KNIPGFLSLDREDQIALLKGSAVEAMFLRSAQVLSKKMPSGYTEVLEERIRKSGMSEEFM
TPMFNFYKSIGELHMTQDEQALLTTITILTPDRPYVKSHEAVERLQETMLDVLRKLCVLQ
HPQEPQYFARLLGRLTELRTLHHYHVEMLTSWKTNDHKFTPLLCEIWDVQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtccagaccaagtcttctagagatattctggcagatcaaggaattcctttc
ctgcaggatcctgacatcttacccttcacctatcccagcacgcagtatccctccatggag
ccgactatgtcttccacaccatactactccagtcagaacttctaccctcagtacaacgga
gacgagtggtactcacacgcagggatatatgaactaaggaaaggacccctggaggtcggc
tatgatgctgagatggaggaggtgacggctgtagtgcctgccatgtgcaagaggacacga
cacatgtcacaggcgggaagggtcaaaggggaggaactgtgtgtggtgtgtggagacaag
gcgtctggataccactataacgctctaacctgtgagggatgtaaaggtttcttcagacga
agcataaccaagaatgctgtgtacaaatgcaagagtggcgggaactgtgagatggacatg
tacatgcgcaggaaatgccaagagtgccggctaagaaagtgcaaagagatgggcatgctg
gctgaattgaagccttcatcatcgctagcaggcctactgacggagatccagtgtaagtct
aaaaggctgcgaaagaacactaagacctccccgggacagtcgaccggagacgagacagaa
gcagcggacaacacagacaacaaacaggtcacctcaaccaccaaactgcccaaggagaaa
gtcgaaatcaccaaagagcagcgggcacttatcaaagccatcttagatgcttacaaccga
catcaaattcctcaagatgtgaccaaaaaactgctgcaagaacagtacagtgcagaggaa
aacttcctcctgttgacagaggtggcaacaagtcaagttcaagtactggtggagtttaca
aaaaatattccaggctttctctctctggatcgtgaggatcagatcgctctgctgaagggc
tcggctgtggaggccatgttccttcgctcagctcaggttctcagcaaaaagatgcccagc
ggatacacagaggttttagaggagagaatacgcaagagtggtatgtcagaagaattcatg
acacccatgttcaacttttacaaaagcatcggagaactccacatgacacaggacgaacag
gctctcctcaccacgataaccatcctgacaccagaccggccttacgtgaagagccatgag
gcggtggagagactccaggagaccatgctggacgtgctgaggaagctgtgtgtcctgcag
caccctcaggagccgcagtactttgcccgcctgctgggccgcctgacggagctgagaaca
ctacaccactaccacgtagagatgctcacctcctggaagaccaacgaccacaagtttacg
ccgctgctctgtgagatctgggacgtgcagtga
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