Notothenia coriiceps (black rockcod): 104955154
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Entry
104955154 CDS
T04920
Symbol
hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104955154 (hps6)
Membrane trafficking [BR:
ncc04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
104955154 (hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS6_C
HPS6
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
104955154
NCBI-ProteinID:
XP_010780692
UniProt:
A0A6I9NXI0
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MARLMLEQLSDFGDYAGGKELTEIFKLTNNNDLKNSLSNVRLSPDGRHVHVLLRKPKVGL
VTFDKYERPHVAQNQKKLDLRLTVPIVDIFYLDHNNNSSSSRGAAAVAVVYENGKAEFWK
FQECKAGWHLLQTSDLCNSPRAKVVSVCACSNLIIWCEERPPSESTPALSSTRNKLRYCV
CRRDFEVEEGAVSLGGVKIALHNNPKFTVVSSGEYVHLLPDVKVKPQLCISKFFLSWSPR
HDTFTVSTTCNNTPLKKLSAKESDLKRLVTDCLGYLSTLQPPEIYDFSPTGCGGLLLLLS
TGWVCLLQKDGTLRHVYKLAENCMVKCGTPQTSLCMYQDTLALLMGQNLHLIDVNCGREM
EKITLKKEGLLYVNRAERCAPHLLSETGLFVVVNRETNSRDVNNLKPFGVDSVESIHPGE
LLVEAVFEEACKYYQQRSLSSTRLTVDTLKKGGRFQAPISLSTILRNYLSTGLRQKGAEP
LQNGDDNTAGQDKLMGSLEAELKALVSLEEVKGSLVRGNVKEVEAVCESLVEKEVARLML
ASEMDKEALLYLNTIFSLFPSQAWRAAQAALQLHYNGEGSLSSRASPEVWKTVLSPATTS
SPPSSLPFTNGGPKHNHSLKGDHVANCKSQISTSPADMPVFELLCYSVFHFQPSWLPHFL
ELAQQQQGSAGLGLGLASSSSWGFSGGRAGEGGENNMPLYKRALAALSSLTPDRDKRQDL
EVELLLVSGRPNAILQALRTLMAKQQWERVTMVAQKFCKRSPLLNKEIFTTLLCEVAQHR
DLDPYLDVLWALCPEDLTVTAILNLVLKNLPSPNTPPSSSSSSSSFSMSSTTSSSPPPFA
DSYSSQLTIGLLKPLLKKVFQRETKPSQRYADILQSPTFPPPAPPRQPRTVSDPNTDSSL
ANDTTPDYLAETPGQQSPTHTAVQRARVALPANPV
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcctgatgttagagcagctgtcagatttcggggactatgctggcggtaaggag
ctgactgagatatttaaactgactaacaataacgacctcaaaaacagcctgtcaaatgtt
cgcctgagcccagatggacgtcatgttcatgtcctcctccgcaagcctaaagttggtctt
gtgacttttgacaagtatgaaagaccccatgttgcccagaaccagaagaagctggatttg
cggctgaccgtgcctattgtggatatcttttatttggaccataataacaatagcagcagc
agcagaggcgcagcagctgtggcagtggtttatgagaatggaaaagctgagttttggaaa
ttccaggagtgcaaagctggctggcatctcctgcaaacatcagatttgtgcaacagcccc
cgagcaaaagtggtgtctgtgtgtgcctgttcaaatctgatcatctggtgtgaggagagg
ccaccttcagagagcacccctgccctcagctccacaaggaataagctgagatactgtgtt
tgcagacgagacttcgaggtggaggagggggctgtcagtctggggggagtgaaaatcgcc
ctccacaataatcctaaattcactgtggtcagctcgggtgaatatgtgcatcttcttcct
gatgtgaaagtgaagccgcagttgtgtatctccaaattctttctctcctggtcccctcgc
catgacaccttcacagtcagcaccacgtgtaacaacactcccctgaaaaagctttcggct
aaagagtctgacttgaagaggttggtgacagactgtttgggatacttatcgactcttcaa
ccacctgagatctacgacttctcccctacaggatgtggaggcctgctgctgctgctcagc
acggggtgggtgtgtcttctgcagaaagatgggacactgagacatgtatacaaactggca
gaaaactgcatggtaaaatgtggcactcctcaaacaagcctatgcatgtaccaggataca
ctggctctgctgatggggcaaaacctgcacctgatcgacgtgaactgtggcagagagatg
gaaaagataacgctgaagaaagaggggttattgtatgtaaacagagctgaaagatgcgcc
cctcacctgctctcggaaactggactttttgtggttgtgaacagagagacgaattcccga
gatgtcaacaacttgaagccttttggtgtcgactcagtggagagtattcaccctggagag
ctcctggtagaggctgtgtttgaggaggcctgtaaatactaccagcagaggagcctgagc
agcactcggctaactgtagacacactaaagaaagggggcaggttccaggcccccatctct
ttatccaccatcctcaggaactacctcagcacagggttgaggcagaaaggagctgagccc
ttgcagaacggagatgacaacacagcggggcaagataaactaatggggtctctagaggct
gagctcaaggctctggtctctctggaggaggtgaaggggagtttagtgagggggaatgtt
aaagaggtggaggcagtgtgtgagagtctagttgagaaagaagtagccaggctgatgttg
gcctcagagatggataaagaggctctgctttacctcaacacaatcttcagcctgtttccc
tcccaggcgtggagagcagctcaggccgccctgcagctacactacaacggggaggggtct
ctgtccagcagggcttccccagaagtgtggaaaactgtcctcagtcctgccacgacgtcc
agccccccatcctccctcccattcacaaacggcgggccaaaacacaatcatagtctcaaa
ggtgatcacgttgctaactgtaaatcccaaatctccacttcccccgccgacatgcctgtg
tttgagctcctctgctactcagtttttcatttccaacccagctggctgccccacttcctg
gaactggcccagcagcagcagggctcagcaggactcgggttgggcctggcctcttcttcc
tcctggggcttctccggtgggagagcaggggagggcggggagaacaacatgccgctctac
aaacgagcgctggccgccttgtccagcctgaccccggaccgagacaagcggcaggacctg
gaggtggagctgctgctggtcagtgggcggcccaacgctatcctgcaggcgctgaggacc
ctcatggccaagcagcagtgggagcgggtcaccatggtggcccagaagttctgcaaacgg
agtccgctgctcaacaaggagatcttcactactctgctgtgcgaggtggctcagcacaga
gacctggacccctacctggacgtgctgtgggcactgtgccctgaggacctcaccgtcacc
gccattctcaacttagtgctgaagaacctcccctccccaaacaccccaccatcctcctcc
tcctcttcttcctcattctccatgtccagtacgacctcctcgtcccctcctcccttcgca
gactcctacagcagccagttgaccatcgggctgttgaaacctctgctgaagaaagtgttt
cagagggagaccaagcctagccagcgctacgcagacatcctacagtcacctacgttcccc
cctcctgcccccccacgccagcccaggactgtctcagatcctaacacagactcatctctc
gcaaacgacaccaccccggattatctcgcagagacacccggacagcagtcacccacacac
acggctgtccagagagcaagggtggcacttcctgctaacccagtctga
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