Notothenia coriiceps (black rockcod): 104955310
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Entry
104955310 CDS
T04920
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03320
PPAR signaling pathway
ncc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104955310 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
104955310 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104955310 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncc03310
]
104955310 (nr1h3)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104955310 (nr1h3)
Nuclear receptors [BR:
ncc03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
104955310 (nr1h3)
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Ortholog
Paralog
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Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
104955310
NCBI-ProteinID:
XP_010780903
UniProt:
A0A6I9P1J0
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All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MSTLSVTDIPDVGRDESKVFDGASELQLDCMVEEGSGSTAMKHGGLLSLADLSRPDDFPA
PPHNGSSLTDISSPLPVELSDIKLDPGSAGDTPASLDGQPVKRKKGPAPKMLGNEVCSVC
GDKASGFHYNVLSCEGCKGFFRRSVIKSAQYNCKNNGRCEMDMYMRRKCQQCRLRKCREA
GMLEQCVLSEEQIRLKKMKKQHEDVTARSSTVVTPTPPLETASLDPQQQEMIEKLVSMQK
QCNKRSFLERPKVTPWPESQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELT
REDQIALLKTSTIEIMLLETSRRYNPTIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEF
SKGMNDLQLDEAEYALLIAINIFSADRPNVQDHGLVERLQQPYVDALRSYIMIKRPNDHL
MFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgtgactgatattccagatgttggtcgtgatgaaagtaaggtgttt
gacggggcctctgagctgcagctggactgcatggttgaggaaggcagtggaagcaccgca
atgaagcacggcggcctgctgtcactggctgacctctccaggccagatgactttcccgcc
cccccacacaatggctcatccctgaccgacataagcagccctctgccggtggagctgagc
gacatcaagttggaccctggatctgcaggggacacacccgccagcttagatggccagcca
gtgaagaggaagaaggggcctgcgccgaagatgctgggcaatgaggtgtgcagtgtctgc
ggggacaaggcctctggcttccattacaatgtactgagctgcgagggctgcaagggcttc
tttcgacgcagcgtcatcaaaagcgcccagtacaactgcaagaacaatggccgctgtgaa
atggacatgtacatgcggcgcaagtgccagcagtgccgcctgcgcaagtgtcgggaggcg
ggcatgctggagcagtgcgtgctctctgaggaacagatccgactgaagaagatgaaaaag
cagcatgaggatgtgacggcccgcagctccacagtggtcacccccacccctcctctggaa
acagcttctctggacccccagcagcaggagatgatcgagaagctggtgtccatgcagaaa
caatgcaacaagaggtctttcctggaacgacccaaagtgacaccgtggcctgagagtcag
gaccctcaaaacagagaggtgcgtcagcagcgcttcgcccacttcactgagctcgcaatc
atgtccgtgcaggagattgtggatttcgcgaagcagcttcctggtttcctggagctcacc
agggaggaccagattgctctgttaaagacgtcaaccattgagattatgctgcttgagact
tctcggcgatacaaccctactatcgacagcatcacgtttctgaaggatttcagctataat
aaggaggattttgccaaagcaggacttcagtttgagttcatcaatcccatctttgagttc
tcaaaaggaatgaatgacctgcagctggacgaggccgagtacgccctgctgatcgccatc
aacatcttttccgcagatcggccaaatgtgcaggatcatggactggtggagaggctacag
caaccctacgtggacgcactgcgctcttatatcatgataaagagaccaaatgatcatctg
atgtttccgcgcatgctgatgaagttggtgagcctccgtacactaagcagcgtccactcg
gagcaggtgttcgccctccgtctccaggacaagaagcttccaccactgctttctgaaatt
tgggacgtcaatgagtga
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