Notothenia coriiceps (black rockcod): 104956805
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Entry
104956805 CDS
T04920
Name
(RefSeq) integrator complex subunit 1-like
KO
K13138
integrator complex subunit 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104956805
Spliceosome [BR:
ncc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
104956805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_RP2B-bd
INT1_R3
INTS1_R4
UNC45-central
CBP1_cbp8
TP_0584_N
Motif
Other DBs
NCBI-GeneID:
104956805
NCBI-ProteinID:
XP_010782649
UniProt:
A0A6I9NXB9
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MNRAKPTTLRRPSAAKPSGHPPTGDFIALGSKNQSGDPKPPAVLLKPASTSSTADRKRET
SSALPSAGLSGLTKRPKLSTTPPVSALGRLADVAAVDKRAISPSIKEPSVVPIEVSPSLL
LDEIEAAESEGNDDHIEGLLCGAVKQLKSNRAKPDITLYLSLMFLAKIKPNVFATEGIIE
ALCSLLRRDASINFKAKGNSLVSVLASNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVD
SSHCKTFVDNIQTAFGTKMPPKSMLLQADTGRSAGDLSAGSSPHPSTPDEDDCQTELLIA
EEKLSPEDEGLIMPRYEELSESVEDYVLEVLKDQLNRRQPMDNVSRNLLRLLTATCGYKE
ARLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNSITQGADDMEVISNLIKIRLKPKVLLNH
YMLCVRELLNANRDNLATMVKLVIFNELSNARNPNNMQVLHTVLQHSPEQAPKFLALVFQ
DLLTNKDDYLRASRALLREIIKQTKHEINFGAFCFGLMQERKETIYLELEFKERFVIQVT
DLLTVSMMLGITAQVKESGLAWDKGEKKNILSPPASSSSSSSATGGCATESDVQLDFCPL
VHDLAFIYACLLLDGLFSSPLQVAYLPTSGPPSREVSLAVMAEGSGLKRKMRSKRGTVGA
TKQCFLKPQPVHGTAHSVVVGELLAGTCVLGPVHHIFNLELVGHKVDAQQAGVAVGRVEG
LEAVAQVLLHGQAGQTTAQLDVLVHRLVILLADIGDSKSVEGRVSDANLACRKLAVSHPV
LLLRHLPMIASLLQGRIHLNFQEFRQQNHMTFFSNVLAILELLQPLVFHSEHQMALQDCL
LSFMKVLRNFQRTRSPFVFITKFLQFTQKYITRDASSAIPYLQKHSDILQVLCAENPELV
QLKSLLAGLTLPVRRSSSEVYPEEGEDDVSTGSLPLVSISASVSLSAADMTMYLKKMSRG
GAVEDVLEVLTEVDEKSRRSPEIIQYFINDLQRLMTSSEDLCRNLAFSLALRCIQNNPCL
ATDFLPTFMYCMGSGKFDVVQTALRNLPEYVLLCQEHADILLHKAFLVGIYGQIDTSSMI
AESMKVLHMESTT
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtgcaaagccaacaactctcaggcgccccagtgctgcaaaaccatcaggtcac
cctccaacaggagacttcattgctctcggttcgaaaaaccagagtggagaccctaaaccc
cccgctgtcctgctgaagccagcatccacaagttcaactgctgaccgtaagagagagact
tcctccgctctgccctctgcaggtctatctggactcaccaagcgacccaaactatccacc
acccccccagtcagtgctctcggacgacttgctgatgttgctgctgttgacaagagggcg
atatcaccctcaataaaggagccatcagtggtgcctattgaagtgtcaccatctctgctt
cttgatgagattgaagctgcagagtctgagggtaatgatgaccacatcgagggactgctg
tgtggagcggtcaaacagctcaaatcgaaccgagcaaaacctgacataacgctgtacctc
agtctcatgttcctggccaaaatcaagcccaacgtttttgctaccgaaggaattattgag
gctttgtgcagcctcctgcgtcgagatgcttcgatcaactttaaagcgaaggggaacagc
ctggtgtctgttcttgcttccaatctgctgatggcagcttacgaggaggacgagaactgg
ccagagatctttgtaaaagtgtacattgaggattctctgggggaaagaatctgggttgac
agttctcactgcaagacttttgttgacaacatccagactgcttttgggacaaagatgcct
cccaagagtatgctgctgcaggctgacacaggccgctcagctggagatctcagtgcaggt
agcagccctcatccctcaacccctgatgaggacgactgccagactgaactgctgatagct
gaggagaaactcagccctgaggatgaagggctgatcatgccgaggtatgaagaactgtca
gagagtgtggaggactacgtgctggaggtccttaaggatcagctgaaccgcaggcagccg
atggacaacgtgtcccggaacctgctgcgtctgctcactgccacctgtggctacaaagag
gcacgactcatggctgtacagaggctggagatgtggctgcagaacccaaagctgactcgc
cctgcccaggacctcctcatgtctctgtgcatgaacagcatcacccagggagcagatgac
atggaagtgatctctaacctgatcaagatccgactcaaacccaaagtcctcctcaaccac
tacatgctgtgtgtcagggagctgcttaatgctaacagagacaacctggccacgatggtg
aagctggtgatcttcaacgagctgtccaatgccaggaaccctaacaacatgcaagtcctg
cacacagtgctgcagcacagccccgagcaggctccaaagttcctagcgctggtgttccag
gacctgctcaccaataaggatgattacctgcgtgcctccagagccttgctgagagagatc
atcaaacagaccaagcatgagattaacttcggggccttctgcttcggattaatgcaggag
agaaaggagactatctatttggaactggaattcaaagagcgttttgttatccaggtgaca
gacttactgactgtctccatgatgctgggcatcactgctcaggtcaaagaatcaggcctt
gcatgggacaaaggggagaagaagaatatcctatctcccccagcctcttcttcttcttct
tcttcagcgacaggaggatgtgccacggagtcagatgttcaactggacttctgcccgctc
gtccacgacttggcctttatctacgcctgtcttctcctcgatggtctgttctcctctcct
ctccaagtggcatacttgccaacgagtggaccaccctcacgtgaagtctctctcgcagtg
atggcggagggaagcgggttgaagaggaagatgaggagcaaacgtgggacagtcggagca
acaaaacaatgctttttaaaacctcagccagtacatggcactgcgcactctgttgtagtc
ggggagctgctcgcagggacctgcgttctgggaccagtgcatcatatcttcaatcttgag
cttgtcggccacaaagtagatgcccagcaggccggtgttgctgtaggacgagtggaaggc
ctggaagctgtggcacaagtcctcctccacggccaggcgggccagacgactgctcagctt
gatgtcctggtgcaccgcctggtgatactgctggctgatatcggagactcaaagtctgtt
gagggccgcgtgtcagacgccaacctcgcctgcaggaagctggctgtgtctcaccccgtc
cttctgctcaggcacctgcctatgattgcaagcctcttacagggtcgtattcacctgaac
ttccaagagtttaggcagcaaaaccacatgacgttctttagcaatgtgctggccatcctg
gagctgctgcagccgcttgtattccacagcgagcaccagatggcgcttcaggactgcctt
ctgtccttcatgaaggttcttcggaacttccagaggactcgttccccgtttgtcttcatc
accaagttcttgcagttcacacagaaatacatcacccgcgatgcatcgtccgccattccc
tacttacagaagcactctgacatcttgcaggttctgtgtgcagaaaacccagaactggtt
cagctgaagtctctgctggctggactcactctgccggtgaggaggtcttcatcagaggtc
tacccagaggagggagaggacgacgtgtccactggttccctgcccctggtcagcatctct
gcctctgtgtctctgagtgcggctgacatgacgatgtacttgaagaagatgtcaagagga
ggggcagtggaggatgtgctggaagtgttgacagaggtggatgagaagtcgaggaggagc
ccagagatcatccagtacttcatcaacgatctgcagaggctcatgacgtcctcggaggat
ttgtgtcggaacctggccttcagtctggccctgcgctgcatccagaacaatccctgcctg
gcaacagacttcctgccaaccttcatgtactgtatgggcagcggtaaatttgacgtggtg
cagacggccctcaggaatcttccagaatatgtcctcctctgtcaggaacacgcagacatc
ttgctccacaaggcatttttagtggggatctacgggcagatcgacaccagttccatgatc
gcagagtcaatgaaggtccttcacatggaatcaacaacctaa
DBGET
integrated database retrieval system
