Notothenia coriiceps (black rockcod): 104957046
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Entry
104957046 CDS
T04920
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04140
Autophagy - animal
ncc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104957046 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104957046 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104957046 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
104957046 (plekhm1)
Membrane trafficking [BR:
ncc04131
]
SNARE
SNARE associated proteins
Others
104957046 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
104957046 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
104957046
NCBI-ProteinID:
XP_010782949
UniProt:
A0A6I9NY46
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MLATQMPDTPPEAKDVKQIKDKLAQSLKALQKRYVTSDTVVTSEDSDANLLCCALEAIFI
HGIKSKYVRSEAGGRSRKGGRCPLPQPFFWSLLKTVTHRDVVTELEKISFVGTEVGLCRA
WLRLALNHGLLECYLASLFREGSKLRGHYQPSALLLNTEEREVLLSYLQGLASLTFNLSY
KSAVLNEWTTTPLALAGLCPMSQADTVELPLNGVDHPTAKSVNKEWDTVSQSSGSSDAQD
MQRGCPGKGTGVLQGGRNAMNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPRSPTGEPWSS
YDLDMPINVNISTKRLQKDSPTEFRESGHCSQDSMREDSFVSSTDPDQNSETAVFSGSDS
ETQGPPSSSQDLVDPLPKSDSEPSPTSNENHVDYTLPEVCNNTSAELPLDTYSEPVESVE
EEEHANLSHETTEPEQEEEETPEPSVHPGSSHSLSILSRKLSTGSLSHSRSWISEDDIYM
PRLEEVPDQSEAPPPAPPAEPSQSPPGVVHRRQRGLFNPFRGLLKLGQLERRGAMGMWRD
NYCELSPYEFRLYLNAEERTCSDNCSLLRCEEARIASPEGRFEVAFPGKRLYLRAANRDE
AEDWVDRIVEAVKKCRPASHAEDQWEVLVPTTENGVDALSPTSTPPSPERTSLASDTGTG
GGQEAPPLQEFDWTRTADIETDAIKETVLYFSNDPEARTWSPLVFSLSLEALKGFRVQEG
RKLLRQTHQIEEIRDVVPDVSLGGPAFFKLLTVRDTLRLRAENPEEARSWRVLIRGALDS
YLESGEDGGSVEPAVGTGNLHRLVQHRLKEDGALLVNLCTVPSEKGLDTQSFKCAGCPQQ
IGPSRGRARLCEFTRQYFCDSCHHGDTSIIPSRMVHNWDLAQREVCKKALHLLAQVEQEP
LLNLDQLNPELVKHADPMSEAHVLRQRLRLLGDYLLTCRSGACKKLQARMEQRTYLLESS
HLYSVLDLRQIAEGQYANYLLTLLQYASNHVFHCDLCTQRGFICQICHANDIIFPFQFDI
TTRCKDCKAVFHLACKAAGVSCPRCQRMKKYLERDLRICGSER
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgctagctacacagatgccagatacgccacctgaggctaaagatgtcaaacagatcaaa
gataagctggcacagtcgctcaaggcccttcagaagagatatgtgacgtcagacacagtg
gtcaccagcgaggacagcgatgctaacctgctctgctgtgcgctggaggccatcttcatc
cacggtatcaagagcaagtacgtccgctctgaggctgggggccggagtcggaagggaggc
agatgtccgctcccacagcctttcttctggagcctcctcaagaccgtcacccatcgtgat
gtggtcactgagctggagaagatcagcttcgtgggaacagaggtgggtctctgccgagcg
tggctgcggctggccctcaaccacggcctgctggagtgctacttagcatcactgtttcgt
gagggctccaagctgcggggccactaccagcccagtgccttgctcctgaacaccgaggag
agggaagtcctgctcagctacctccagggtctcgcctctcttacgttcaacctatcctac
aagtctgctgtcctcaacgaatggaccaccacgcctctggctctcgccggactctgcccc
atgtcccaggcggacacggtcgaactgcccctcaacggcgtagaccaccccaccgccaaa
tctgtaaacaaagaatgggatacagtgtcgcagtcgtcaggctcttcagatgcacaggat
atgcagagagggtgcccagggaaaggcacaggggtattacaagggggcaggaatgcaatg
aactcgtcaaatttaagcctggacaccacgggctcctcgcagctctcctccagcctgagc
tctgacagcctgctgcaggggcaggacccccgcagccccacaggagagccctggtcctca
tacgacctggacatgcccataaacgtcaacatcagcaccaagaggctacagaaggattct
ccgacagagttcagggagagcggacactgcagtcaggactccatgcgtgaagactccttt
gtctccagcacggatcccgaccagaactcggagacggccgttttcagcggctccgacagc
gagacccagggtcccccttcttcatcccaggacctcgtggaccctcttccaaaatctgat
tcagagccctcgccaacatctaatgagaatcatgttgactacactctgcctgaagtgtgc
aacaatacctctgccgagctccctttggacacatacagtgagccggtggagtctgtagaa
gaagaagaacatgcaaacctttctcatgagactacagagcctgaacaggaagaagaagaa
actccagagccttcagtgcatccaggctcaagtcactccctcagcatcctgagcaggaaa
ctgtccacaggttctctatcacattctcgttcctggatctctgaggatgacatctacatg
ccccgcctggaggaggtgccggaccagagcgaggcgcctcctccagcccccccggctgag
ccctctcagtccccccccggcgtcgtccatcgcagacaaagagggctgttcaaccctttc
cggggcttgctgaagctcggccagctggagcggcgcggtgcgatgggaatgtggcgcgat
aactactgtgagctgtcgccctacgagttccggctgtatctcaatgcagaggagcgcacc
tgcagcgacaactgctccctgctgcgctgtgaggaggctcgcatcgcctcacctgagggc
cgcttcgaggtggccttccctgggaagcggctgtacctccgggcggccaatcgggacgaa
gccgaggactgggtggaccggatcgtagaagccgtcaagaaatgccgtccagcatctcat
gctgaagaccaatgggaggttctggtacccaccactgagaacggtgtggatgcgttgtcc
ccaacctccaccccccccagccctgagcgcacttcactagcctctgacacagggacaggg
ggggggcaggaggcgcctcctctacaggaatttgactggactcggactgctgatatagaa
acagatgcgatcaaagaaacagttttgtacttctccaatgatcccgaggctcggacatgg
tctcctctggtcttctccctctctttggaggccttgaaaggtttccgggtccaagagggg
aggaagctgctgcggcagacccaccagattgaggaaatccgggacgtggtgcctgacgtc
tctctgggagggccggcctttttcaaactgctgaccgtcagggacacactgagactccga
gcggagaacccggaggaggctcgctcctggagggttctgatccgcggagctctggactcg
tacctggagagcggggaggacggaggctccgttgagccggctgtggggactggaaacctc
cacagactggtgcagcacagactcaaagaagatggggccctgcttgttaatctgtgcact
gtgccctcagagaaggggctcgacactcagagcttcaagtgtgcagggtgtcctcagcaa
attggcccgtcccgaggcagagcccggctttgtgagttcacacgacagtacttctgtgac
tcctgtcaccatggcgacaccagcattatcccttcacgcatggtgcacaactgggacctc
gcacaaagagaggtgtgtaagaaggccctgcatctgctggctcaggtggagcaggagcct
ctgctgaacctggatcagctgaaccctgagctggtgaagcacgcagaccccatgtctgag
gcccacgtgctgcggcagaggctgcgcctgctgggagactacctgctcacctgccgcagt
ggagcctgcaaaaaactccaggccagaatggagcagcggacgtacctgctggagtcgagc
catctgtacagcgtgctggacctgcgacagatagcagagggtcaatatgcaaactacctg
ttgacactgctgcagtacgcctccaaccacgtgttccactgtgacctgtgcacgcagcgc
ggcttcatctgtcagatctgccacgccaatgacatcatcttccccttccagtttgacatc
accaccaggtgtaaagattgtaaggcggtgtttcacctggcctgcaaagctgcgggggtt
tcgtgtcctcgctgtcagcggatgaagaaatacctggagagggatctgcggatctgcggg
tctgagcgctga
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integrated database retrieval system
