Notothenia coriiceps (black rockcod): 104957095
Help
Entry
104957095 CDS
T04920
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104957095
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104957095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
104957095
NCBI-ProteinID:
XP_010783011
UniProt:
A0A6I9PA60
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKISTECELPRWHMNDF
FHSFLIVFRILCGEWIETMWDCMEVAGTGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSG
DNLSTDEDGEMNNLQIAIGRITRGIDWFKAFLVRSILQIINKKPKDNEEGPNEDEDPKTE
GIEMNHFDSSQHFKMADGIPNCLVECGPSGLIVDGEFSLNVPIAQGESDFENMDEDDTDD
VDDADDSEFSDEEHNPHYSEKYKDVHCLLGNIKLMGALNDGDSSVCSTVDYQPPEPEPEE
VEEEEPDPVEPEACFTDSCIKRWPCLTVDITQGRGKKWWNLRRACFTIVEHDWFETFIIF
MILLSSGALAFEDIYIERRRTIKIILEYADKVFTYVFIIEMLLKWVAYGFKTYFTNAWCW
LDFFIVDISLISLAASFMGFSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPS
IFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTSELFPMWEVNNHSDCLLLQEATQEA
RWVNVKVNYDNVGQGYLSLLQVSTFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIF
IIFGSFFTLNLFIGVIIDNFNQQKKKFGDKDIFLTEEQKKYYEAMKKLGSKKPQKPIPRP
TNPIQGLVFDFISQQFFDIFIMVLICLNMVTMMVETDNQSAEKEDFLFKVNVAFIVVFTG
ECSLKLIALRQYFFTNGWNVFDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRI
LRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDIFN
FETFGGSIICLFEITTSAGWDALLLPMLDKEFPDCDPNFENPGTDVKGNCGNPLMSMAFF
CSYIIVSFLVVVNMYIAIILENFNVAQEESGDALCEDDFEMFNETWEKFDLDGTQFIEYS
QLSDFCDTLQPPLKVAKPNRIPLMAMDLPLVIGDRIHCLDVLMAVTQMVLGDTLEMAAMR
ESIEAKFILSNPTSDSFAPITTTVRHKEEEMAAVVVQRAYRKHLLKRCTRHAAFMQRCKR
KGQKDEGENPLEKEGMLARRMGVLYGSKLDLAEEMEQADIETLANQQPSNPETLSDDTES
QSDTEPPEPNVIVVPVEITNEVLLHSAPDPYLFYLHANLKETIV
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcaagattattggtaactcagtgggagctttaggaaatctaactttggtgctg
gccatcatcgtcttcatctttgccgtggtgggtatgcagctctttggcaaaaactacaag
gaatgtgtgtgcaagatctccacagagtgcgagctgccacgctggcacatgaacgacttc
ttccactcattcctcatcgtgttccgcatcctgtgcggggagtggatcgagaccatgtgg
gactgcatggaggtggccggaactgggatgtgtttagtcgtcttcatgatggttatggtc
attggaaatctagtggtgctgaacctcttcctggccttactgctcagctcattcagcgga
gacaatctctcaacagacgaagacggagagatgaacaatctccagatcgccattggcagg
atcacacgaggcattgactggttcaaagcgttcctcgttcgatccatcctccagattatc
aataaaaagcccaaggacaatgaggagggtccgaatgaagacgaggaccctaaaactgag
ggaattgaaatgaaccactttgactccagtcaacatttcaaaatggctgatgggatacct
aattgtttggttgaatgtgggccttctggattaattgtggatggagagttcagtctaaat
gtgccaattgctcagggagagtcagactttgaaaacatggatgaggatgatactgatgat
gttgatgatgctgatgactcagagttttcagatgaagaacataatccacattattcggaa
aaatataaagatgttcattgtttactgggaaatatcaaactgatgggtgctttgaatgat
ggggattcctcagtgtgtagcacagtggactatcaaccacctgagcctgagccagaagaa
gtggaagaggaagaaccagaccccgtagagccggaagcctgcttcactgacagctgtatt
aagcgctggccatgtctgactgtggacataacccagggtagaggcaaaaaatggtggaac
ctcaggagggcttgctttactattgtggagcatgactggtttgaaacctttataatcttc
atgatcctcttgagcagcggggctttggcatttgaagacatatacatagaaagacgccgc
accatcaaaattattctggagtatgctgacaaagttttcacctacgtctttatcatcgag
atgctgcttaaatgggtcgcgtacggctttaagacctacttcactaacgcctggtgttgg
ttagactttttcattgtagatatttccctgattagtttagctgccagctttatgggattc
tctgaccttggaccaatcaaatccctccggactctcagggccctaaggcctcttcgagcg
ctgtcaagatttgaaggcatgagggtggtggtgaacgctctcgttggtgctattccctcc
atcttcaacgtgctgctggtgtgtctgatcttctggctcatattcagcatcatgggagtt
aacctgtttgctgggaagttctaccgctgcattaataccaccacgtctgaacttttcccc
atgtgggaggtcaataaccatagcgactgcttgctcctccaagaggcaacgcaggaggcc
cgctgggtcaatgtcaaggtcaactatgacaatgtgggacaaggctacctgtcactgctt
caagtgtcaacttttaaaggctggatggacatcatgtatgctgctgttgactcaagagag
gtagaggagcagccttcttatgagatcaacctctacatgtacatttactttgtcatcttc
atcatctttggctctttcttcacactcaacctctttattggtgtcattattgacaatttc
aaccaacaaaagaaaaagtttggagataaagacatctttctgactgaggagcaaaaaaag
tactatgaggccatgaagaaacttggttccaagaaaccgcagaagccaattccacgtcca
acgaacccaatccagggattggtgtttgacttcattagccagcaattctttgacatcttc
atcatggtgctcatctgcctcaacatggtgacgatgatggtggagacggacaaccaaagt
gcagagaaggaagatttcctttttaaagtgaacgtggctttcattgtcgtgttcaccgga
gagtgttcgttgaagctcattgccctgcgacaatacttcttcacaaacggatggaacgtt
tttgactttgttgtggtcatcttgtcaatagccggtacaatgctctcagacatcattgag
aagtattttgtgtcaccaactctgttcagagtcatcagactagcaagaataggcaggatt
ctgcgtcttatcaaaggagccaagggcattcggacgcttctctttgccctaatgatgtca
cttcccgccctattcaacattggcctcttgctcttcctcattatgttcatcttctccata
tttggcatgtcaaactttgcctatgtcaaaaaggaagctggaatcgacgatatatttaat
ttcgagacgtttggtggcagtattatctgcttgtttgagatcacgacctctgccggctgg
gatgcacttttacttccaatgctggataaggagttcccagattgtgatccaaattttgag
aacccaggcacggatgtaaagggcaactgcggcaatccgctcatgagcatggcattcttc
tgcagctacatcatcgtctcattcttagtggtggtcaacatgtacatcgccatcatcttg
gagaacttcaacgtggcgcaggaggagagcggagatgcgctctgtgaggacgattttgag
atgttcaatgaaacttgggaaaagtttgacttggacggaactcagttcattgagtatagc
cagctctcagatttctgtgataccttgcagccgccactgaaggttgccaagcccaaccga
attcccttaatggcaatggatctgcccctggtcatcggggacaggatccactgcctggat
gtcctgatggccgtcacacagatggtcttgggagacacgctggagatggcggcgatgcgg
gaaagcattgaggccaagttcatcctcagcaacccaacctcagactcctttgcgccaatt
accacaacggtgcgccacaaagaagaggagatggccgctgtggtcgttcagagggcttac
cgcaaacacctgctgaaacgctgcacgcgccacgccgcttttatgcaacgatgtaagagg
aagggtcaaaaggacgaaggtgaaaatcctctagagaaagagggaatgctcgcacgaagg
atgggggtgctctatggcagcaaattggaccttgcagaggagatggagcaggctgatata
gaaactctagcaaaccaacagccttctaatccagagacactttcagatgacacagagtcc
caaagtgacacagaaccccccgagccaaatgtaattgttgtacctgtagaaataacaaat
gaggttttattacattctgcccctgacccatacctcttttacctacatgcaaatctgaaa
gagacaattgtatga
DBGET
integrated database retrieval system
