Notothenia coriiceps (black rockcod): 104958231
Help
Entry
104958231 CDS
T04920
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
ncc04260
Cardiac muscle contraction
ncc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104958231
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104958231
04261 Adrenergic signaling in cardiomyocytes
104958231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104958231
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104958231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
MinC_N
DUF2201
Motif
Other DBs
NCBI-GeneID:
104958231
NCBI-ProteinID:
XP_010784262
UniProt:
A0A6I9P7T5
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MEHVWKDDNELDNMVYYNAKDDLNETEEVKGRKNRYLPDDFEVDPDFKRLVSYNTTAVHI
PTDIYEGSTTILNELNWTEALEDIFRKNKEEDPSLLWQVFGSATGLARYFPASPWIDSST
SANKIDLYDVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIKTSVSKMLETLSDDDY
VNVVYFNEKATYASCFENLVQANVRNKRVLQEAVKGIMAKGITNYRGGFELAFEQLAQTN
VSRANCNKIIMLFTDGGEERAEEIFKKYNPKQAVRIFTFSVGQHNYDKGPIQWMACANKG
YYYEIPSIGAIRINTQEYLDVLGRPMVKAEKKSKQVQWTNVYLDALELGLVITGTLPVFN
KTNTGSKKSQNQLILGVMAIDVSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPL
TAKFHEPVTLDFLDAELENEIKVEIRKKMIDGNTGSHTISTLVKSQDERYIDASQRTYTF
APVKGTDYSLALVLPNHSLHYIRANIADTITQAKSFLGKDVSESLMADKFDEYGYTFIAP
RVYCKDLKPPNKNKNNTEFLVEFNDYIDTKTPNNPMCNVELVNRLLLDAGITSTLIKHWK
GTDVQPGVVARFVATDGGITRVFPKSAGLDWQEEAETYDSSFYKRSLDNDLYIFTPTPYL
SKENSTDDTVLVSKAVNINVDGIALKPAVVGIKLDIGAWMTSFINTTQKINCNDEICGCQ
RNDVYVDCVLLDDGGFLVMSNRDEHIDQIGRFFGGMDPILMFNLVNSSLFTFKKTFDYQS
LCDPEKEIKGAAGLRSVYVPTIADILNLGWFATAAAWSILQQLLVSITFPNFLNAAEIDE
ELSDARLKEVCITEQTQYYFETNNLSFRGTIDCENCTRLYHAEKLPNTNLVFIIADAKLT
CSSCDTKPLIQDEQKSNGPNPCEMALNPRYRKGPAVCFDNNEHEKDPDCGGASSLSPSLW
LMVGLQLVLLWVLTGSRPHAIPS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgtggaaggacgacaatgagctcgacaacatggtttactacaatgccaaa
gatgatcttaacgagacagaagaagtaaaagggaggaagaaccgatatcttccggatgat
ttcgaggtggatccggacttcaaacgacttgtctcgtacaacaccaccgccgtgcacatc
cctacggatatttacgaaggctctaccaccattttaaacgagctaaattggacggaggcc
ttggaggacatattccggaaaaacaaagaggaagatccttcactcctctggcaggtgttt
ggctctgcaaccggattggctcgctacttcccagcatccccttggatagactcgagcacc
tcagccaataagatcgacctctacgatgtgcgcaggcgaccgtggtatattcagggggca
gcgtcacctaaggacatgctgatcctggtagatgcgagtggcagtgtatctggtctcacc
ctcaaactcatcaaaacgtccgtcagcaagatgctggagaccctttctgacgatgactac
gtgaacgtggtctacttcaatgaaaaggcaacatatgcatcgtgctttgagaacctggtg
caggccaacgtgcgcaacaagagggtgctgcaagaggccgtgaagggcatcatggcaaag
ggaatcaccaactacagaggcggcttcgagctggccttcgagcagctcgcacagacgaat
gtgtcaagggcaaactgtaacaagattatcatgctgttcactgacggaggagaagagagg
gcagaggagatctttaaaaaatacaaccccaagcaagcggtgcgcatctttacattttca
gtaggtcaacacaactatgataaaggaccaatacagtggatggcctgtgctaataaaggg
tactactatgagatcccatctataggagcaatccggatcaacacccaggagtatctggat
gtgttaggcaggcccatggtgaaggctgaaaagaaatccaagcaggttcaatggaccaac
gtctacctagatgctttggaactcggcctggtgattactggaactctgccagtcttcaac
aaaaccaacacaggctcaaagaaatctcaaaaccagctcatcttgggggtaatggctatt
gatgtctccctagaagatatcaagagactgacgcctcgctttacttttggaccaaacggc
tactactttgccattgaccccaatggatacgtgctgctccaccctaatctccagccactg
actgccaagtttcatgaacctgttacactggacttcctggatgcagagctggagaatgag
atcaaagtggagataaggaagaaaatgattgacggcaacacagggagtcacacaatatca
acattggtgaaatcccaagatgagcgctacatcgacgcgagtcagaggacttacaccttt
gccccagtgaagggcacagattacagcctggccctggtgcttcctaaccacagtttgcat
tacattcgggccaacatcgccgacaccatcacccaggcaaaatcgtttttggggaaagat
gtttctgaaagcctgatggcggacaagtttgatgaatacggctatacattcattgcaccg
agggtgtactgcaaggacttaaagccacctaacaagaacaaaaacaacaccgagttcctg
gttgagttcaacgattacattgacacaaagactccaaacaaccccatgtgtaatgtggaa
ctggtgaaccgattgctgctggatgctgggatcacatcaactctgatcaagcattggaaa
ggaaccgatgtgcagcctggtgttgttgccagatttgttgccaccgatggagggatcacc
cgagtcttcccgaaaagtgctgggctcgactggcaagaagaagcagagacgtatgattca
agcttctataagagaagtttggacaatgatctgtacatcttcactccaacaccctacctc
agtaaagagaactcaactgacgacacagtcctggtgagcaaagcagtaaacatcaatgtt
gatggtattgcactcaaaccagctgttgtcggcataaagttggacattggtgcctggatg
acaagcttcatcaacaccacacagaagatcaattgtaatgatgagatctgtggctgtcag
cgaaacgatgtgtatgtagactgtgtccttctggatgacgggggcttcctggtgatgtcc
aatcgggatgaacatattgatcagatcgggcgcttctttggtggtatggacccgatcctc
atgtttaacctggtcaactcatccctgttcacctttaagaaaaccttcgactaccagtcg
ctctgtgaccctgagaaagagatcaagggggcggcaggcctgcgctccgtctacgtgccc
accattgcagatattttgaatttgggatggtttgctacagctgcagcgtggtcaatactg
caacagttactggtcagcatcactttccccaatttcctgaacgcagccgagattgatgag
gaattgtcagacgccaggctgaaagaggtctgcatcacagagcaaactcaatactacttt
gagaccaacaacctgtctttcagaggcacaatcgactgtgaaaactgcaccaggctctac
cacgctgaaaagctgcccaacacaaacctggttttcatcatcgctgatgcaaaactcacc
tgctcgtcatgtgacacaaagccgttaatacaggacgagcagaagtctaacggtcctaat
ccctgtgaaatggctctgaatcctcggtataggaaagggcccgcggtctgttttgataac
aacgaacacgagaaggaccctgactgtggcggggcgtccagcctgagcccctcactttgg
ctgatggtgggccttcagctggttctgctctgggttttgactggttccagaccccatgcc
atcccgtcatga
DBGET
integrated database retrieval system
