Notothenia coriiceps (black rockcod): 104963041 Help Entry 104963041         CDS       T04920                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism ncc  Notothenia coriiceps (black rockcod) Pathway ncc04115   p53 signaling pathway ncc04145   Phagosome ncc04148   Efferocytosis ncc04350   TGF-beta signaling pathway ncc04510   Focal adhesion ncc04512   ECM-receptor interaction ncc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ncc00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     104963041   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104963041  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     104963041    04148 Efferocytosis     104963041   09143 Cell growth and death    04115 p53 signaling pathway     104963041   09144 Cellular community - eukaryotes    04510 Focal adhesion     104963041   09142 Cell motility    04820 Cytoskeleton in muscle cells     104963041  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ncc04131]     104963041   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ncc00536]     104963041 Membrane trafficking [BR:ncc04131]  Endocytosis   Phagocytosis    Opsonins     104963041 Glycosaminoglycan binding proteins [BR:ncc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104963041 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS TSP1_CFP_C cEGF Laminin_G_3 EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  104963041 NCBI-ProteinID:  XP_010789895 UniProt:  A0A6I9PQE3 LinkDB All DBs Position Unknown AA seq 1171 aa AA seqDB search MMLCGIFLLLMLWSCESARLAESPDDSSVYDLFDLARVSKRHNGVSIVKGADPYSPAYKV LNPDLIPQVPDSSLRDLLDSIQAERGFLLLVNLKQFKKTRGSLLTIEKNDGSGPVFEIIS NGKANTLDVVYSTVTQQQVVSIEDADLATGQWKNITLFVQDDRVQLFVGCVEINISEMDL PISQVLTPEVADIAKLRIGKGAVGDRFMGVLQNVRFVFGTTIDAILRNKGCQNGATLTDV MTLENPINGSSPAIRNDYTGHKAKDVQSVCGFSCDDITGMFKELKGLGLVVKQLTFDLRK VSDESNLIRNQMKIRSGICIHNGIVHNDKEEWTVDGCTECTCQNSATVCRKISCPLLPCA NATVPDGECCPRCDPGDEAEDDWSPWSDWTHCSVTCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYPQECDKRFKQDGGWSFWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGMDCQGDGR QTEICQKSPCPINGSWGPWSIWDTCSVTCGGGFQTRKRLCNDPIAQYGGKECGGDATGSQ LCNKKACPIDGCLSSPCFPGAKCTSFPDGSFKCGKCPLGYTGNGVACKDIDECKAVSDAC HTLNGVHRCENTQPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCHK NANCIYLGVFSETMFRCECRPGYAGNGRICGEDSDLDGWPNTDLRCVENATYHCKKDNCP NLPNSGQEDHDKDGLGDECDSDDDNDRIPDDRDNCPKVYNPGQYDADRDDIGDSCDNCVH EANTDQTDTDNNGEGDACAIDIDGDGILNENDNCPFVYNEDQRDTDRDGVGDHCDNCPLE HNPDQIDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYIANANQADHDKDGKGDACDHDDD NDGIPDDKDNCRLAFNPDQLDSDGDGRGDICKDDFDQDNILDIHDVCPENFAISETDFRR FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFINTERD DDYAGFVFGYQSSSRFYTVMWKQVTQTYWSHTPTRAQGYSGLTIQVVNSTTGPGEHLRNA LWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNIY DKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatcttcttgctgttgatgctttggagctgtgaaagcgccagattg gcagagagcccagatgatagcagtgtgtatgacttatttgatctggcccgggtaagcaag agacacaatggagtgagtatagtgaaaggtgcagatccctacagccctgcatacaaagtc ctcaacccagacctgatcccccaagtccccgacagctccctcagggacctcctcgactcc atccaggctgagaggggcttcctcctcctggtcaacctgaagcagttcaagaaaaccagg ggaagccttttgaccatcgagaagaacgatggatctggacctgtatttgagatcatctcc aacgggaaggcaaacactctggatgtggtctactccaccgtgacccagcagcaggttgtg tccatcgaggatgcagatttggccaccggacaatggaagaacatcaccctgtttgttcag gatgaccgggtgcagctctttgtcggctgtgtggagatcaatatatcagagatggatttg ccaatctctcaagtgttgaccccggaggtggcagacattgccaagctcaggattggaaaa ggagctgtaggggacagatttatgggagtgcttcaaaatgtgcgctttgtctttggaacc actattgatgccatactgagaaataagggatgccagaatggagctactttaactgatgtc atgaccctggaaaacccaatcaacggctccagccctgccattaggaatgattacaccggg cacaaagccaaagatgtgcagtctgtctgcggcttctcttgtgacgacatcaccggcatg tttaaggagctcaagggactcggtttggttgtgaaacagctgaccttcgatctgcgcaaa gtgtctgatgaaagcaatctcatcagaaaccaaatgaaaatccgcagtggcatttgcatc cacaacggcatcgtgcacaatgacaaagaagaatggactgtggatggctgcaccgagtgc acctgccagaactctgctactgtgtgtcgcaaaatctcctgccctctgctcccatgcgcc aatgccaccgtgcccgacggagagtgctgccctcgctgtgacccaggcgacgaagcagag gatgattggtccccctggtctgactggacacattgttctgtgacttgtggtcggggcatc cagcagcgcggacgttcctgtgaccgcatcaacaacaactgtgagggcacctctgtccag acccgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggtggttggagc ttctggtctccctggtcttcgtgctctgtgacctgcggggagggggtcatcacccggata cgcctctgcaactcccccacaccccagatgggtggcatggactgccagggagatggacgt caaacagaaatctgccaaaagtccccctgtcctatcaatggaagttggggaccttggtca atttgggacacctgcagtgttacctgtggtggagggtttcagacccgcaaacgtctctgc aatgatcccattgcccaatatggaggaaaggagtgtggtggtgatgctactggttcccaa ctgtgcaacaaaaaggcctgcccaattgatggttgcctctccagcccatgctttcctggc gcaaagtgcaccagcttccccgacggctctttcaagtgcggcaaatgtcctcttggctat actgggaatggcgtcgcttgcaaagacattgatgagtgtaaagcagtctctgatgcttgc cacacacttaacggagtccatcgctgtgaaaacactcagcctggttataactgtctgccc tgccccgcccgcttctccggtccccagccttttggaagaggggtggaacaggcaactgct aagaaacaggtttgcaaaccccgtaacccttgccaagatggtagccacgactgccataaa aatgcaaactgcatttacttgggcgtcttctccgagaccatgttccgctgcgagtgcagg ccaggttacgccggaaatggcagaatttgcggagaggacagtgatcttgatggatggccc aatactgacctgcgttgtgtggagaacgccacctaccactgcaagaaggataactgcccc aacctccccaactctggacaggaagatcatgacaaagacggtctgggtgatgaatgtgac agtgatgatgacaatgataggatccccgatgatagggataactgcccaaaagtgtacaac cccgggcagtatgacgcagacagagatgacattggcgacagctgtgacaactgtgtgcac gaggcgaacactgaccaaaccgacactgacaacaatggagagggtgatgcctgtgctatt gacattgatggcgatggcattctgaacgagaacgacaactgtccatttgtttacaacgag gaccagagagataccgacagggacggggtgggagaccattgtgacaactgccctctggag cacaaccctgatcagatcgactctgactcagatctcattggagacaagtgcgacaacaac caggacattgacgaggacggtcaccagaacaacttggacaactgcccctatattgccaat gccaaccaggcagaccacgacaaggacggcaagggtgacgcatgtgaccatgacgatgac aacgacggcatccctgatgacaaagacaactgtaggctggcatttaaccctgatcagctg gactctgatggtgatggccggggtgatatttgcaaagacgattttgaccaagacaatatt ctggacatccatgacgtgtgccctgagaactttgctattagtgaaacagacttccgcaga ttccaaatggttcctctggaccccaagggcacctcacagattgaccctaactgggtggtc cggcatcagggcaaggagttggtgcagactgtcaactgcgaccctggcattgctgttggt tttgatgagttcagcgcggtggatttcagtggaacattcttcatcaacacagaaagagat gatgactatgctgggttcgtgtttggctaccagtccagctcacgcttctacacagtgatg tggaaacaggtcacacagacctactggtcccacacccccacaagagctcaaggctactct ggcctgacaatccaagtggtcaactctaccaccgggcctggtgagcatctgaggaacgcc ctgtggcacaccggagacaccgcaggacaggtgcgtactctgtggcacgacccaaagaac atcggctggaaagacttcaccgcctacagatggcatctgacccacagacccaagactgga ctgataagagtggtcatgtacgaaggcaagagaatcatggctgattctggaaacatctac gacaaaacatatgctggtgggcgactaggcttgtacgtcttctctcaggagatggtttac ttctcagatctcaaatacgaatgcagagacacataa

DBGET integrated database retrieval system