Notothenia coriiceps (black rockcod): 104964482
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Entry
104964482 CDS
T04920
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00514
Other types of O-glycan biosynthesis
ncc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104964482 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104964482 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104964482 (lfng)
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104964482 (lfng)
Glycosyltransferases [BR:
ncc01003
]
Glycan extension
O-Glycan
104964482 (lfng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
PSK1
Motif
Other DBs
NCBI-GeneID:
104964482
NCBI-ProteinID:
XP_010791579
UniProt:
A0A6I9PKF7
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MFKNNGKKTAITVASTACLCMLLLLLAVQHLRVQVEDEGAKGEDAGTRSLLQDAAREKEQ
DAQTKKGFSAYFTKLTRSRRDVEKPARSASAEAPPAEDISADDIFIAVKTTKKFHQSRLN
LLLDTWISRNIPQTYIFTDGEDEDLKKKIGSHAINTNCSAAHSRQALSCKMAVEYDKFIE
SGKKWFCHVDDDNYVNVRTLVKQLSQFPHTQDMYIGKPSLDRPIEATERLGDNKMKPVNF
WFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTVGYIIESVLGVPLTRSSL
FHSHLENLQQVSRSEIHKQITLSYGMFENKSNIINLKGAFPVEEDPSRFKSVHCLLYPDT
PWCPPQVAF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaataacggaaagaagaccgctataactgtagccagcacagcctgtctgtgc
atgctgctgctgctgctggcggtgcagcatctccgggtccaggtggaggatgagggggcg
aagggagaagatgctggaacccgctctcttctccaggatgccgctcgggaaaaagagcag
gacgcccaaactaagaaaggattctcggcgtacttcaccaaactgacccggagtcggagg
gacgtggagaagcccgcgcgctcagcgtccgctgaggcgcctccagctgaggacattagc
gctgatgacatattcatcgctgtgaagaccaccaagaagttccaccagtccaggctgaat
ctgctcctggacacctggatctcaagaaacataccacagacatacatcttcacggatgga
gaggatgaggatcttaaaaagaaaattgggagtcacgccatcaacaccaactgctctgca
gctcatagtcgacaggcgctgtcttgcaagatggcggtggaatatgacaagttcatagag
tcggggaaaaagtggttctgtcacgtagatgacgacaactatgtgaatgtgaggactctg
gtgaagcaactgtcccagttcccccacacccaggacatgtacatcggtaaacccagcctg
gaccggcccatcgaggccacagagaggctgggggacaataagatgaaaccagtcaacttc
tggtttgctactggaggagccggcttctgtgtgagccggggtctggcgctgaagatgagc
ccatgggccagtggcggtcacttcatgaacacagcagagaagatccgcctgcccgacgac
tgcaccgtgggctacatcatcgagtcggtcctgggggtccctctgacccgcagcagcctg
ttccactcccacctggagaacctgcaacaggtgtcaagatctgagatacacaaacagatc
accctcagttatgggatgtttgaaaacaaaagtaatatcattaatctgaaaggagctttc
cctgtggaggaggatccatcaaggttcaagtctgtgcactgcctcctgtacccagacacc
ccgtggtgtccccctcaggttgccttttag
DBGET
integrated database retrieval system
