KEGG   Notothenia coriiceps (black rockcod): 104966682
Entry
104966682         CDS       T04920                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ncc03037]
    104966682 (ift122)
Cilium and associated proteins [BR:ncc03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   104966682 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40 Zn_ribbon_IFT122 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd TPR_IF140-IFT172 Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML TPR_IFT80_172 TPR_GEMI5 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_Vps41 TPR_7 TPR_COPA_B Beta-prop_SPT8 Beta-prop_WDR35_2nd Beta-prop_IFT140_2nd TPR_2 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 104966682
NCBI-ProteinID: XP_010794210
UniProt: A0A6I9Q0W3
LinkDB
Position
Unknown
AA seq 1186 aa
MRAVLAWKETIREQCVYDLAFKPDGTQLIIAAGLRVLVYDVADGAIIQPLKGHKDIVYCV
AYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSGDFGLW
SPEQKSVNKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGGSSSPI
WSIAWNPSKDEHKDILAVADWGQKLSFYQLSGKQIGKDRPLTYDPCCVSYFSKGEYIVMG
GSDKQASLYTKDGVRLGSIGEQNAWVWTCRVKPDSNFVVMGCQDGTIACYQLIFSTVHGL
YKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRNRLAIQLPEKILIYELYSDD
SSDMHYRTKEKICRKFECNLLVVCSQHIILCQEKRLQCLSFTSVKEKEWVMESLIRYIKV
IGGSQGREGLLVGLKNGAILKIFVDNLFPITLLKLSTSVRCLDMSASRNKLAVVDEHNTL
LVYDINSKELLFQEPNANSVAWNTQCEDMLCFSGNGYLNIKASNFPVHQQKMQGFMVGYN
GSKIFCLHVYSMLAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDSDWRDLATEALEGLD
FDTAKKAFIRIRDLRYLELINSIEERKKRGENDNELFLADVYAYQGKFHEAAKLYKRTGH
ESRALSMYTDLRMFDYAKDFIGGTDPKSSRILMTKQADWAKSSKEPRAAAEMYLSAGEHL
KAIDIIGEHGWEDMLIDIARKLDKAEREPLAKCALYFKKLKHHGYASETYSKMGDLQALL
QLHVETRHWEEAFSLVDKHPQFKNDVFVPYAQWLAENDRFEEAQKAFHMAGRQNEAVKVL
EQLTHNAVVENRFNDAGYYYWMLSMQCLDIARAESEDQRDEMLKKFERFQHLAELYHVYR
SIQRYTDEPFSSHMPETLFNICRFLLNNLTKDIPQGISKVNTLYALAKQSRRLGAYKLAR
YSYEKLQKLHIPSRFQESIELGSLTIRSKPFHDSEDLIEGMMCYRCSTNNPLLNNQGSVC
INCRQPFIYSASSYEVLPLVQFYLEEGISDEEAVSLIDLEVPHTDQSDARWHDMDNGEMQ
ALKMKDDLDDHEEDPFTAKMSFEQGGSTFVPVKVSRLVLRSMSRRDVLIKRWPRPLKWEY
FRSLLPDVSITMCPTCFKMFHSEDYELLVLQHNCCPYCRRPIDEPN
NT seq 3561 nt   +upstreamnt  +downstreamnt
atgagagccgttctagcgtggaaagagacaattcgtgaacagtgtgtatatgaccttgcc
tttaagccagatggcacccaactcatcattgccgcggggcttcgtgtcctggtttatgat
gtggcagatggagctataatccagcctttaaaaggacacaaagacatagtgtactgtgtg
gcctatgctaaagatgggaagaggtttgcttcagggtcagcagacaaaagcataattatc
tggacctcaaaactggagggtattttaaaatatactcacaatgactctatccagtgcgtt
gcctacaaccctgtcactcaccaacttgcctcctgctcttccggtgactttggtctatgg
tcccccgaacaaaaatctgtgaacaaacataaagttagcagcaaaataacatgttgtggg
tggacgaatgacggacagtaccttgcccttggcatgatgaatggagtggtgagcattcgg
aacaagaatggagaagagaaggtcaagatagagcgcccaggaggctcctcttctcctatc
tggtccatagcctggaacccctccaaggatgagcacaaagacattctggctgtggcagac
tggggtcagaagctgtccttttatcagctcagtggaaagcagattggaaaagacaggcct
ctcacctatgacccttgctgcgtcagctacttctcaaagggcgagtatattgtcatgggg
ggctctgacaaacaggcctccctctacactaaagatggcgtgcggctgggctccatcgga
gagcagaacgcctgggtgtggacgtgccgggttaagcctgactccaactttgtggtgatg
ggctgccaggatgggaccatcgcctgctaccaacttatcttcagcacagttcacggcctc
tacaaggatcgctatgcttacagagacagcatgactgatgtcattgtccagcacctcatc
actgaacaaaaagtgaggataaagtgccgtgagctggtgaagaagatcgccatttacaga
aaccgtcttgctatccagctgcccgagaagatcctcatctatgagctctattcagacgac
tcctccgacatgcactaccggaccaaggagaagatttgcaggaagtttgaatgcaacctg
ctggtggtgtgctcccagcatatcatcctgtgtcaggagaagagactccagtgcctgtcc
ttcaccagtgtcaaggaaaaagaatgggtgatggagtctctaattcgctacatcaaagtg
atcggtggttcgcaaggcagagagggtctgctcgtggggttaaagaatggagctatcctg
aagatctttgttgacaacctgtttcccatcacactgctgaagctgtcaacgtcagtgcgc
tgcctggacatgagtgcgtcccgcaataaactggctgtggtggatgagcacaacactctc
ttagtctatgacatcaacagtaaagagctgctttttcaggagcctaatgcgaacagtgtg
gcctggaacacccagtgtgaggacatgctgtgcttctctggtaatggctaccttaacatt
aaggctagcaactttcctgtccaccagcagaagatgcaaggctttatggtcggctacaat
ggctctaagatcttttgtctccacgtctattccatgttggctgtggaggtgcctcagtca
gcgcccatgtaccagtacctggagaggaagatgttcaaggaggcctaccagatcgcctgt
ctcggtgtgaccgacagtgactggagggatttagccacagaggccctggagggacttgac
tttgacaccgccaagaaggccttcattagaatcagagacctgcgctacctggaactcatc
aatagcatcgaggagaggaagaagcggggtgagaacgacaatgagctgttcctggcagac
gtctatgcctaccaggggaaattccatgaggcagccaagctctacaaacgtaccggccac
gagtccagagccctgagcatgtacactgacctgcgcatgttcgactacgccaaggatttc
attggagggacagaccctaagagctctcggatcctgatgaccaagcaggcagactgggct
aagagcagcaaggagccgcgggcagcagcggagatgtacctgtcggcaggagaacatctc
aaagccatcgacataataggggaacacggctgggaagacatgttgatagacatcgctcgt
aaattggacaaggccgaacgtgaaccgctggcaaagtgcgcgttatacttcaagaagctg
aagcaccacggctatgcctcagagacttactccaagatgggggacttgcaggctctactg
cagctgcatgtggaaacccggcactgggaagaggctttctcactggtggacaagcaccca
cagttcaaaaatgatgtctttgtgccttatgctcagtggttggctgagaacgaccgcttt
gaggaggcacaaaaagcatttcacatggcggggcgacagaacgaagcagttaaagtcctt
gagcagcttacccacaatgcagtggtggagaacaggttcaacgatgcagggtactattac
tggatgctatcaatgcaatgtctagacatcgctcgagcagaaagtgaagaccagagggat
gaaatgctgaagaagtttgagcgttttcagcatcttgctgagctctaccatgtctaccgc
tccattcagcgctacacggatgagcccttcagttcccacatgccagagacactcttcaac
atctgcaggttccttctgaacaacctcaccaaggacataccgcaaggcatttccaaagtc
aacaccttgtatgcattggccaagcagagtcgaaggctgggggcttataagcttgccagg
tattcctacgagaaactccagaagctgcacatcccctctcgcttccaggagtccatagaa
ctgggcagcctcaccattcgctccaaaccctttcacgacagcgaggaccttattgagggc
atgatgtgctaccgctgctccaccaacaaccccctgctgaataaccaggggagcgtgtgc
atcaactgcaggcagcctttcatctactcagcctcctcatatgaggtgttgcctctggtg
cagttctacctggaggagggcatcagtgatgaagaggcagtttctctgattgacttggag
gtccctcacacggatcagagtgacgcacgctggcacgatatggacaacggtgagatgcag
gctttgaagatgaaggatgatttggacgatcatgaggaagacccatttacagccaaaatg
agctttgagcaggggggctcgacctttgtcccagtgaaggtgagtcgcttggtgctgcgc
tccatgagcaggagggacgtcctgatcaaacgctggccccggccgctcaaatgggaatac
ttccgctccctgctgcccgatgtgagcatcacaatgtgccccacctgcttcaagatgttc
cacagtgaggactatgagctcctggtgcttcagcacaactgctgtccttattgtcgccga
cccatcgatgaaccaaactga

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