Notothenia coriiceps (black rockcod): 104966757
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Entry
104966757 CDS
T04920
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104966757 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104966757 (nup210)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104966757 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_8th
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_9th
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_5th
Ig_NUP210_7th
Ig_NUP210_15th
Ig_NUP210_16th
Ig_NUP210_6th
Ig_NUP210_4th
Ig_NUP210_14th
NUP210_Ig
Big_2
Motif
Other DBs
NCBI-GeneID:
104966757
NCBI-ProteinID:
XP_010794340
UniProt:
A0A6I9Q168
LinkDB
All DBs
Position
Unknown
AA seq
1885 aa
AA seq
DB search
MISLRLPVSVLLLLITVILVNGSSKLNIPKVLLPFARSTRINFTLETTEGCYRWSSTRPE
VASIKAVDEEIGRGCSRKAVLQALSTQHSRLTSIILAEDVVTGQVLRCDAIVDIISEIQI
VSTTRELHLEDSPLALKIHALDSEGNTFSTLAGLVFDWSLVKDVDVNGISDSYNSLRVLK
FSESTYTPPAYISEMERVGKQGDIILVSGLKTGHAKLKAKIQEPLYKDVGAAEVKLLILE
NILLSPAHDVYLLAGTSIRYKVLKIRQGTMTELSMPCDQYELHVQNSVIGTNGNPDVSVA
SLDQSTSTVTAIQLGYINVVLDHKSLRMQGVSRLPNSTLYVVEPGYLGFKIQPGDSWVLE
TGRVYDIVIEVFDKFGYKIYLSDNVRISTAFPLEYFELLESSLNGSYHRVKALKEGLSLI
DATLTAVVDENGLVHPLANPVHNEQDVEIYNPIVLSPSILTFPWQPRVGTYQYTIKATGG
SGNFSWSSSNTAVATVTVKGVMTTVSDIGVSVVYAHDLRNQLHFGQMKVYVVEPVAMDFA
PCPVEAKVGSVLDLPLRIFGLLGEVEKERVMLSDCSHFDLQVEEENNGIFQLLSGRMAPG
QERCSGVTAKALAPGYTVLTVSYTHGNVHLSAKITIAAYLSLRAIDPVSVAVVTLGSSKD
MLFEGGPRPWVLEPSKFFCNLIAEDDATVSLTLTSPSSHNYNQHWVRATCQALGEQVLEV
MVGNKASVTNPFPAVEPAVVKFVCAPPSRLTLLPVYSSPQLDLTCPLLQQNKQVVPVSNY
RNPILDLAAFDEQGRKFDNFSSLSILWESSIVSLASIEPTLPMELQPFEDGNKQMKLHGR
QTVLVHHQTGIAAITVTALGYQDLHLTAAKVPSPYDPLTPVSATLELLLVEDVTVSPEMV
TIYNHPDVRANLALREGSGYFFINTSMKGIANVLFQEAQGTAQVSPIHPGEVKVMVHDLC
LAFPAPAQATVHVSDILEVYVRVVDKVEIGKSVRAYVRVLDDNKKPFPVSFFHFMNLKLT
AASAIVSLKPLAQATELDTAVFVVKGASIGQTTLSAVVVDKNGRRIASAPQQIEVFPPFK
LIPRKMTLLIGAMMQITSEGGPQPQSNILFSISNEDKASVNGMGHVRGVAIGNVTVTGLV
QAVDAETGKLVVVSQDQVEVEVVQLTAIRIRAPITRMKTKTQMPVYVMGLTNSQTPFSFA
NAIPGLTFTWSTTKRDILDVQPRHNEANVEPQPAHNFGMMVTGRTRGRTGLKVVLRVTDP
EALQLLGSLQELTDEIQIQVYDKLHMLNPEVETGELLMAPNSALKLQTNRDGVGALSYRT
LDSPDQAVIAQVDDKGFLSSGSLTGISSLLITSQETFGINQTLILALKVVPVSYVRFSTS
PVLDTNTRESLKAFPLGIVLTFTVHFHAGTGEVLHSSNSHLTFSTNRDDLVQVGVGPANN
TLTVRTINVGLTLLAVWDSENVGVADFVPLPVEHAIHPEEAHRLVVGDVVCFTAQISSPE
GGHGTWSSSANGVLQVDPKSGAAVARDSGTVTVYYEIPGVLKTYREIVVEASTRTAAVAQ
ATPVRIGKETKILLTTRGRGNNLIGTCSPAQAEAISQLKPETSVSCHLSFSSDVIDFSAN
DVFKTHTSFDSSIGSYTCSITLQPMTEQQSRVLSMSMTDLLVGAGLEGGASSGERVSARL
PIEPGLYVDQTELLLSNLHPSAELTVYGPTAALSNMEVVSSSPNIAVQDIEVHQGFPSFS
KYTISAVDPQAAISASISISSPSCGPTIVIPVALIHVADHNAAKLAAATPVVNFEGSHSL
HSFINSYQMMFFTLFALLAGTAIIIIVLHTLFSPREPAYHHAFIQRTPPISGLNSPAVNS
FNRTIPRMDPSSSPRSRLYSPDYKS
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgttaagactacccgtgtcggttttgttattattaataaccgttatcctagtt
aacggttcttcaaaactaaacattcccaaagtgttgctaccgtttgccagaagcacaaga
atcaacttcacgttggaaactactgaaggttgctacagatggtcttccaccagaccagag
gtggcctccatcaaggctgtggatgaggagattgggagaggctgctccaggaaggctgtc
ctccaggctctctccacccagcactccagactgaccagcatcatactggctgaggatgtt
gttacaggacaggtgctgcgttgtgacgccattgtggacatcatcagtgagatccagatc
gtgtcgaccaccagagagcttcatctcgaggactcgccactggcactcaaaattcatgca
ctggactctgaaggaaacaccttcagcacccttgcaggtctagtgtttgactggtcctta
gtgaaggatgtagatgtgaatggaatctctgactcttacaattcattacgggtacttaaa
ttctcagagtccacctacactccccctgcgtacatatctgaaatggagcgtgtcgggaaa
cagggcgatattattttggtgtcaggattgaaaacgggacatgctaaactaaaggccaaa
atacaagagccattgtacaaggatgtgggcgctgcggaggtgaagctgctgattctagag
aacatcctgctgagccctgcacacgatgtctacctactggcgggaacttccatccgatac
aaagtcctgaagataagacagggcacgatgacagagctctccatgccctgtgatcagtat
gaactgcacgtccagaacagtgtgatcggcactaatggaaacccagacgtctctgtggcc
agtctggatcaaagcacttccacagttacagcaattcaacttggatacatcaacgtggtg
ctggatcacaaaagccttcgaatgcaaggagtgtctcgcctacccaacagcactctgtat
gtggttgaaccaggatacctagggtttaaaattcagccaggagacagctgggttctggaa
acaggcagagtatatgacattgtcatcgaagtctttgataaatttggctataagatctac
ctctctgataatgtccgcattagcactgctttccccttggagtactttgaactcctggag
tcttctctgaatggatcctatcatcgtgtcaaagcgctcaaagaaggcctctctctcatt
gatgctactcttacagctgttgtggatgaaaatggactagtccacccactcgccaaccca
gtgcacaatgaacaggatgtagaaatctataaccccatagttcttagtcccagtattttg
acatttccatggcagcccagggtcggaacttatcagtacacaataaaggcgacaggaggg
agtgggaatttcagctggtcttcgtccaacacagctgtggccacagtgacggtgaaaggc
gtgatgacaacagtcagtgacatcggcgtcagtgtcgtttacgctcatgatctacgaaac
caactacacttcggacagatgaaggtgtatgttgttgagcctgttgccatggacttcgcc
ccctgccccgtggaggccaaggtgggctcggtcctggacctccctctcaggattttcggc
ctgttgggggaggtggagaaggagcgcgtcatgttgagtgactgctcccactttgacctg
caggtcgaggaggagaacaacggcatcttccaactactaagcgggaggatggctccaggc
caggagcgctgcagtggggtgacggccaaggccctggcccccgggtacaccgtgctcacc
gtgagctacacccacggcaacgtccatctcagcgccaagatcactattgctgcttatctt
tctctcagagcgattgaccctgtatctgtcgccgtggtgactctgggatcttctaaagac
atgttgttcgagggcgggcccaggccttgggttttagagccatcgaagttcttctgcaac
cttatagctgaggacgatgccactgtgagcctaaccctgaccagcccctcatctcacaac
tataaccagcactgggtcagagcaacctgccaggccctgggagaacaggtgctggaggta
atggtggggaacaaggccagtgtaaccaatccttttcccgctgtggaaccggcagtggtg
aagtttgtgtgcgcccccccgtctcgcctcaccctgctccctgtgtacagcagcccacag
ctggacctgacctgcccgctgctgcagcagaacaaacaagtggtacctgtttcaaattac
cgtaatcccattttggacttggctgcttttgatgaacaaggaagaaagtttgacaacttc
agctctctgagcatactgtgggaatcgagcattgtgtcgctggccagcatcgagcccact
ctgcccatggagctgcagccgtttgaagacggcaacaaacagatgaaactccacggacga
cagacagtgcttgtacatcaccaaacaggcatcgctgccatcactgtgacagctctgggt
taccaggacttacatctcacagcagccaaagttcccagtccatatgaccctttgacccca
gtctcagccactctggagctgctattggtggaggatgtgacggtctctcctgagatggtt
accatatacaaccatccagatgtgcgggcgaacctggcactgcgagaaggttcagggtac
ttctttatcaataccagtatgaaagggatcgcaaacgtgctctttcaggaggcccaagga
acagctcaggtctctcccatccacccgggggaggtgaaggtgatggttcatgacctttgt
ctggcctttccagcgcctgcccaggctacagtgcacgtttctgacatcctagaggtttat
gtgagagtggttgacaaggtggagattggcaagtctgtgagagcgtatgtcagagtcttg
gatgataataagaagcctttcccagtcagctttttccatttcatgaatcttaaactcacg
gcagcttccgcaatcgtctctctgaaaccattagcgcaggccacagagctggatacagct
gtgttcgtggtgaaaggcgcctctattggtcagaccactctgtcagctgttgttgtggac
aaaaatgggaggagaattgcatctgcacctcagcaaattgaggtgtttccaccgttcaaa
ctcattccaaggaaaatgacgctgttaattggagcaatgatgcagatcacatcagagggg
ggccctcagcctcagtccaatatcctgttctctatttccaatgaggacaaagcttctgtt
aacggcatgggccatgtgaggggtgttgccatcggtaatgtcaccgtgactggactggtc
caagctgtggatgctgagactgggaaacttgtggttgtgtctcaggatcaagtagaagtg
gaagttgtgcaattgacagccattagaatcagagcacctataacaagaatgaagacgaaa
acacagatgcctgtttatgtgatgggtctgaccaatagtcaaacacccttctcctttgcc
aatgccatacctggcctcaccttcacatggtccaccaccaagagagacattctggatgtc
cagccaagacacaatgaggctaacgtggagccccagccggcgcacaactttggtatgatg
gtgacgggaagaacgagagggcggacagggcttaaggtggtgctcagagttactgacccg
gaagctctgcagctcttaggaagtctacaagaactcacagatgagatccagatccaggtc
tatgacaagctacacatgctcaatcctgaagtagagactggggagctactgatggctccg
aactcagccctcaaactacaaactaacagggatggtgtgggtgcgctctcgtatcggact
ctggatagccctgaccaggctgttatcgctcaagtggacgataagggcttcctctcctct
ggctctctgactggcatctcctctctgctgatcacctcccaggagacctttggcatcaat
caaactctcatccttgctttgaaggtggtgcctgtgtcctatgtgcgcttcagtaccagc
ccagtgctggacacaaacaccagagagagcctgaaagccttccccctgggcatagtgctc
accttcactgtccactttcatgccggcactggagaagtccttcacagctccaactcccac
ctcacgttctccactaacagagatgacctggtgcaggtgggggtcgggcccgctaacaac
actctgacagtgaggaccatcaacgtgggcctcactcttcttgcagtgtgggacagtgag
aacgtgggtgtggcggacttcgttccacttcctgtggagcacgccatccacccagaagag
gcccacaggctggtggtgggggacgtggtttgcttcaccgcccagatctccagccctgaa
ggtggtcacggtacatggagctcctcggccaatggcgttcttcaggtggatcctaaaagt
ggtgcagcagtagccagagactctgggaccgtcactgtgtactacgagatacctggtgtt
ttgaaaacctacagagagatagtagtagaagcatccaccaggacagctgctgtggcgcag
gctacacctgtcaggatcggcaaggaaacaaagatcctgctcacaaccagagggagagga
aacaacctcattggcacctgttccccagcccaggcagaagctatttctcagctgaagcca
gagacctcagtcagctgccatctgagcttcagcagtgatgttattgacttctctgctaat
gatgtcttcaaaacacacaccagcttcgactccagcattggctcctatacatgttccata
accttgcagccaatgacggaacagcagagccgtgtgctcagcatgtccatgaccgacctg
ctggtgggggccggcctggagggcggggcctcctctggggagcgggtcagcgcccggctg
cccatcgagcccggcctctacgtcgaccagaccgaactgctgctctccaacctgcacccg
tcagcggagctcaccgtctacggccccacggctgccctgtccaacatggaggtggtgtct
tcctctcccaacattgctgtccaagacattgaagtacaccagggcttccccagcttctcg
aagtacaccatcagcgccgtggaccctcaggcagcgatctctgcctccatctccataagc
agcccctcctgcggccccacgatcgtcatcccagtcgctctgattcacgtggctgatcac
aacgctgccaagctagcagctgctactccagttgtgaacttcgaggggagccactccctg
cacagcttcataaactcctaccagatgatgttcttcaccctgttcgctctgctggccggt
accgccatcatcatcatcgtccttcacacgctgttcagcccgagggaaccagcttatcac
catgctttcatccagaggacaccacctatttccggtttaaactctccagcagtgaattcc
tttaaccgcacgataccgaggatggacccaagcagcagccccaggtctcgtctttattct
ccagactacaagtcctga
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integrated database retrieval system
