Notothenia coriiceps (black rockcod): 104966881
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Entry
104966881 CDS
T04920
Symbol
socs7
Name
(RefSeq) suppressor of cytokine signaling 7 isoform X1
KO
K04699
suppressor of cytokine signaling 6/7
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104966881 (socs7)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
104966881 (socs7)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SH2
Motif
Other DBs
NCBI-GeneID:
104966881
NCBI-ProteinID:
XP_010794502
UniProt:
A0A6I9Q0V3
LinkDB
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Position
Unknown
AA seq
755 aa
AA seq
DB search
MNNAQDMSPDFVLMRLVSAAEDDRLDAENGNLPPGGVSVAGLGKDVLAHSGVKPGLDISR
DPTVGLEHPNKGHPPHGETAPDTGGTESRAPAPAPPQSPMEAQGFDFAPSPGLRPQLLVF
SNIMRNGEGILELDRRNQQRDAMGLDQSAGPAVNNNSRSTGDAQQQDLMDRTWGAHPPGE
MHQGAAELCRRHRLITTTPEWPLLSERSNPLTVIDSKWGCASRDREGAVFELARRFGELG
VGAVPKMLLKAGELPQCSCQGAHRPAGGGVEPRGDPTETSDALLVLEGLGSGDVGLDMDE
CTEGDPDDEIGRREFLLNRKREIVQKMSGSFSLSSFQAELRRQVEGSEAAAAHLHGSQVC
SLHGGLARRISQVSSGDSEVAAQVTATTPLSTPTPVQNSPWGTSPNLSQVSTPRRRPERC
ASAPRTPTSGWGSGGEKMLKVPGKSKKGSLKIRLSKLFRTKSCSGSNHLLDKRPSVTYSV
SSAGSLVDMASSPGAEPDSHSQPRLTRAHSAFSPASLSASLSAFTGETVSLVDVDISRRG
ANTPHPPTPPPPPRRSLSLLDDIAGPQPGPFLVSVMGASLQSLPLPLPPPPLPSHATIQH
SLSLNDAFLRALPHAAPSPMGAPPSRQAPPPMLCALRRSEASNFTASLRELEKCGWYWGP
MNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGVTHHTRMEHYRGTFSLWCHPKF
EDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGKI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcgcaagatatgtcgcccgatttcgtgttgatgcgcctggtttccgcggcc
gaggatgaccgcttggacgcggaaaacgggaatctgccgccgggaggagtgtcggtggcg
gggctggggaaggacgtcctggctcacagcggagtcaaaccggggttggatatcagccga
gacccgacggtgggccttgagcatcccaacaaaggccatccgccgcacggagagactgca
cctgacaccggggggacggagagccgagccccggcgcctgctccgccgcagagccccatg
gaggcccagggctttgacttcgcccccagccccggtttaaggcctcagctgctcgtcttc
tccaatataatgcggaatggagaggggattttagaattagaccgtcggaatcagcaaagg
gatgctatgggtttggatcagagcgcaggcccggcggtcaataacaacagccggagcacc
ggggacgcgcagcagcaggacctgatggaccggacatggggagcgcatccgccgggcgag
atgcaccagggagctgcggagctttgccgccggcaccgactcatcactaccacgcccgag
tggcccttgttgtcggagagatccaaccctctcaccgtgattgactctaaatgggggtgc
gcctccagggacagagagggagccgtgttcgagctggcgcgacgtttcggggagctgggg
gtcggtgcggtgcccaagatgctgctcaaagccggggagctcccgcaatgttcgtgtcag
ggagctcacaggccggccggaggaggagtggagcccaggggcgaccccactgaaaccagc
gatgctctgctggtgctggaggggctggggagcggggatgtcggccttgacatggacgag
tgcacggagggggatccggacgatgagatcggacgcagagagtttctactgaacaggaag
agggaaatagttcagaaaatgtcggggtctttctccctcagcagcttccaggcggagttg
aggcggcaggtggaggggagcgaggcggcggctgcacacctgcacggctctcaggtgtgc
agcctccacggggggttagccaggaggatctcgcaggtaagctccggggactcagaggtg
gcagcccaggttacagccacaacaccgttatctacacccacaccggtccagaactcacct
tggggcacaagtccaaacctgagccaggtgtccacccccaggaggaggccggagaggtgt
gccagcgcgcccaggactcccacctcaggctggggctccgggggggaaaagatgctcaaa
gtgccagggaagtccaaaaagggctcgttaaagatccgcctgagtaaactgttccggact
aaaagctgcagcggctccaatcacctgctggacaaaaggccctcagtgacctactcagta
tcctctgctgggagtctggtggacatggcgagcagccctggagctgagccggacagccac
agccagcccagactgacccgggcccacagtgccttctcccccgcctccctctctgcctcc
ctctctgctttcaccggtgagacagtttccctggtggatgttgatatttcgcggcgaggg
gcgaacacgcctcacccccccacgcctccccctcctccacgcagaagcctcagcctgtta
gatgacatagcggggcctcagcctggtcccttcctagtgagtgtaatgggtgcctccctg
cagtccctccctcttcctctccctcctcctcctcttccctcacacgccaccatccagcac
agtctcagcctcaatgacgccttcctccgggccctcccccacgcggccccctccccgatg
ggcgcccccccctccagacaggctccgccccccatgctgtgcgccctgaggcgatctgag
gccagcaacttcaccgccagcctgcgagagctggagaagtgcggctggtactggggtccg
atgaactgggaggacgcggagatgaagctgaaggggaaacctgacggatccttcctggtg
agggacagctcggaccctcgatacatcctgagcctcagcttcaggtcgcagggcgtcaca
caccacacacgcatggagcactacagagggacgttcagcctgtggtgtcacccgaagttt
gaggaccgctgccactcggtggtggagtttatcgagcgagccatcatgcactccaagaac
ggaaaattcctctacttcctgcgctccagagtcccaggtaaaatatag
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