Nocardiopsis changdeensis: KGD84_00405
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Entry
KGD84_00405 CDS
T08932
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ncg
Nocardiopsis changdeensis
Pathway
ncg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KGD84_00405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncg03400
]
KGD84_00405 (nth)
Enzymes [BR:
ncg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KGD84_00405 (nth)
DNA repair and recombination proteins [BR:
ncg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KGD84_00405 (nth)
Prokaryotic type
KGD84_00405 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QUX22918
LinkDB
All DBs
Position
82029..82772
Genome browser
AA seq
247 aa
AA seq
DB search
MPRDTPNASDPAPTPTGESRLALVRRARRMYRELSELYPDAHAELNFTTPLELLVATILS
AQCTDKRVNQVTPTLFARYPDAEAYASADRDELEGIIRPLGFFRAKANSLMGLGQSLCEH
HGGEVPGNLADLVKLPGVGRKTANVLLGNAFGVPGITVDTHFGRLVRRFGWTDEEDPVKV
EHAVGELFPRKDWTMLSHRVVWHGRRVCHARRPACGACVVARWCPSFGEGPTDPETAAKL
LRMRSFA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgacacaccgaacgcgagcgaccccgcgcccacccccacgggtgagagccgc
ctcgcgctggtccgccgagcccgcaggatgtaccgggagctctccgagctctatccggac
gcccacgcggagctgaacttcacgaccccgttggagctgctggtcgccacgatcctgtcc
gcgcagtgcacggacaagcgggtcaaccaggtcaccccgaccctgttcgcgcgctacccc
gacgccgaggcctacgcctccgcggaccgggacgagcttgaggggatcatccgacctctc
ggcttcttccgcgccaaggcgaacagcctcatgggcctggggcagtccttgtgcgaacac
cacggaggcgaggtcccggggaacctcgccgacctggtcaaactacccggtgtagggcgg
aaaaccgcaaacgtactgctcggtaacgccttcggtgtgcccggaatcacggtggacacc
cacttcgggcgcctcgtccggagattcgggtggaccgacgaggaggacccggtcaaggtc
gagcacgccgtcggggagctgttcccgcgcaaggactggacgatgctctcccaccgcgtc
gtctggcacggccgccgcgtctgccacgcccgcaggcccgcctgcggggcgtgcgtggtg
gcccggtggtgcccctccttcggcgagggccccaccgacccggagaccgcggccaagctg
ctgcgcatgcgctccttcgcctga
DBGET
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