Neomoorella carbonis: MCACP_22110
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Entry
MCACP_22110 CDS
T11049
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ncj Neomoorella carbonis
Pathway
ncj03030
DNA replication
ncj03410
Base excision repair
ncj03420
Nucleotide excision repair
ncj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCACP_22110 (ligA)
03410 Base excision repair
MCACP_22110 (ligA)
03420 Nucleotide excision repair
MCACP_22110 (ligA)
03430 Mismatch repair
MCACP_22110 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncj03032
]
MCACP_22110 (ligA)
03400 DNA repair and recombination proteins [BR:
ncj03400
]
MCACP_22110 (ligA)
Enzymes [BR:
ncj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MCACP_22110 (ligA)
DNA replication proteins [BR:
ncj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MCACP_22110 (ligA)
DNA repair and recombination proteins [BR:
ncj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MCACP_22110 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCACP_22110 (ligA)
MMR (mismatch excision repair)
DNA ligase
MCACP_22110 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MCACP_22110 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
HHH_8
RUBY_RBDX
5_3_exonuc
SUKH-4
Motif
Other DBs
NCBI-ProteinID:
WXJ95717
LinkDB
All DBs
Position
complement(2156668..2158707)
Genome browser
AA seq
679 aa
AA seq
DB search
MDLAEARQRVEELRRLIEEHNYRYYVLDQPVISDREYDALMQELIALEETYPELLTADSP
SQRVGGAPREEFNPVRHPEVLLSLNDAFDEGDLLDFDRRVREITGGEVSYLIEPKIDGLT
VALTYIDGVFSLGATRGDGQVGEEVTANLRTIPLLPLRLRQPLPHLVVRGEVYMPKAAFA
RLNAEREEAGEPLFANPRNAAAGSLRQLDPKVTASRNLSLFVYQVIKVTGAQVTTQAAAL
DFLAELGLPVNPYRFLARDIQAVLAEVKAWTPERRAALPYEIDGLVIKVNDLALHPVLGA
TAKAPRWAVAYKFPAEQATTRVEGIILRVGRTGVLTPTAILTPVRLAGTTVSRATLHNED
YIRQKDIRIGDTVVIQKAGDIIPEVVEVLPEHRTGAEEVFTMPEKCPACGAAVVRPPGEA
AHRCTGGLACPAQVLEGIIHFASRGAMDIQGLGPAIISQLLEAGLIRDAADLYYLQKEDL
LKLERFGEQSASNLIAAIAAAKDRPLERLLFGLGIRHVGERAARTLAGHFGSLEKLIAAS
EEELTSLPDIGPRIAESIREFFAEPRNLAVLEKLKKAGVRMEAERAAAPAGPLSGKTFVI
TGTLPGLTRKEAEELITRAGGKVVSSVSKKTDYLVAGEKPGSKYTRARELGVPVIDADGL
KRLLEGKRAWRREDLYDRA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggatctggctgaggcccggcagagggtagaagaactgcggcgcctgatcgaagaacat
aattaccgctactacgtcctcgaccagccggtgatcagcgaccgggaatacgacgccctg
atgcaggaattgatagccctggaagaaacctacccggaactcctgacagcggattctccc
agccagcgggtaggcggagcgccccgggaagaattcaaccccgtccggcatccggaagtt
ttattgagtttaaatgacgccttcgatgagggcgatttgctggatttcgaccgccgggtg
cgggaaataaccggcggcgaggtgtcctacctgatcgagcctaaaatagacggcctgacg
gtggccctcacctatattgacggggtttttagcctgggggccacccggggcgacggccag
gtgggagaagaagtgacggcgaatctacggaccatcccgttgctccccctgcgcttgcgg
caacccctgccccacctggtagtgcggggggaagtctacatgcccaaggcggcctttgcc
cgcctgaacgccgaacgggaggaggccggggagcccctcttcgccaatccccgcaatgcc
gcggccggctctctgcgccagctggatcccaaagtgacggccagccgcaatttaagcctt
tttgtctaccaggtaatcaaagtcaccggagcacaagttactacccaggccgccgccctg
gacttcctggccgaactgggtttacccgtcaacccttaccgcttcctggcccgggacatc
caggctgtgctggcagaagtaaaggcctggacaccggagcgccgcgctgccttaccctat
gaaatcgacggcctggtgatcaaggttaacgacctggccctgcatcccgtcctgggcgcg
acggccaaagcgccgcgctgggccgtggcctataaattcccggccgagcaggcaacgacc
cgggtggaagggattatcctccgggtagggcgcacgggcgtcctgacaccaacagctatt
ttaacgccggtgcgcctggccggaactaccgtcagccgggctaccttgcataatgaagac
tacatccggcaaaaggacatccgcatcggcgatacggtagttatccagaaggccggcgac
atcatcccggaagtggtggaggtcctgcccgaacatcgtaccggagcggaagaggttttt
accatgccggagaagtgcccggcctgcggcgcggcagtagtccgcccgccgggagaagcg
gcccaccgctgcaccgggggtttagcctgcccggcccaggtcctggaagggatcatccac
tttgcctcccggggagccatggacatccagggcctggggccggccatcatttcccagctc
ctggaggccggcctcattcgtgatgcggccgacctctactacctgcaaaaggaagacctg
ttaaagctggagcgctttggcgagcagtcggccagcaacctcattgcggccattgccgca
gccaaggacaggcccctggaacgcctgcttttcggtctcggcattcgccatgtgggcgag
cgggcggcgcggaccctggccggccacttcggctccctggagaagctaatcgcggcctca
gaggaggaattgacctccctgcccgatataggcccccgtattgctgagagtatccgggaa
ttttttgccgaaccgagaaatctggccgtcctggagaagctgaaaaaagccggggtacga
atggaagctgaaagagcggccgctccggccgggcctttaagcggcaagacctttgtcatc
accggcaccctgccgggccttacccgcaaggaagcagaagagctcattacccgcgccggg
ggcaaggttgtaagcagcgtgagcaaaaagaccgattacctggtggccggcgaaaagccg
ggatccaagtacacccgcgcccgggaactgggggtgccggtgatagatgcggacggttta
aaacgattgctggaaggaaaacgagcctggcggcgagaagatctatatgaccgggcttaa
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integrated database retrieval system
