Candidatus Nitrosotenuis chungbukensis: QVH35_02955
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Entry
QVH35_02955 CDS
T09234
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nck
Candidatus Nitrosotenuis chungbukensis
Pathway
nck03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QVH35_02955 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nck03400
]
QVH35_02955 (nth)
Enzymes [BR:
nck01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QVH35_02955 (nth)
DNA repair and recombination proteins [BR:
nck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QVH35_02955 (nth)
Prokaryotic type
QVH35_02955 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
Ogg-HhH
AGOG
DUF2400
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WKT58395
LinkDB
All DBs
Position
436482..437135
Genome browser
AA seq
217 aa
AA seq
DB search
MERILGGMMKTMNSVKPPRMTALRELHDAEDGNPFSILIGTILSARTKDENTAKVVKKLF
AEYKTPKDLAGAKIKDIEKIIRSIGFYHVKARRIVDVAKIIQSQYKGVVPDNLDQLVMLP
GVGRKTANCVLVYAFEKPAIPVDIHVHRISNRLGLVETKTPEETEFELMKKVPKEYWLRV
NDTFVMYGQNICKPISPMCNVCKIKKLCKYYKTRNAS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggagagaattcttggcggcatgatgaagaccatgaattctgtaaaaccgccgcgaatg
acagcactaagagagctgcatgatgcagaagatggcaatcctttcagtattcttattgga
acaattctttctgcaaggacaaaagacgaaaacacggcaaaggttgtaaaaaaattattt
gccgaatacaaaacgccaaaggatctggcaggtgcaaaaataaaagacattgaaaaaatc
ataagatcaattggtttctaccatgtaaaggcaaggcgcatagttgatgttgcaaaaata
atccaatcacaatacaaaggagttgttcctgataatttggatcagcttgtcatgcttcca
ggagtcggacgaaaaacagcaaattgcgtgttagtctatgcctttgaaaagccagccatt
ccagttgacattcatgttcacagaatatcaaacaggcttggccttgttgaaacgaaaacg
cctgaagagacagaatttgaactcatgaagaaagttccaaaagaatactggttaagagta
aacgatacgtttgtcatgtatgggcagaacatatgcaagcccatatcgccaatgtgcaat
gtttgtaaaatcaaaaaattatgcaaatactacaaaactaggaacgcttcttaa
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