Nymphaea colorata (blue-petal water lily): 116248788
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Entry
116248788 CDS
T07418
Name
(RefSeq) uncharacterized protein LOC116248788
KO
K12173
BRCA1-A complex subunit BRE
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116248788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116248788
03036 Chromosome and associated proteins [BR:
ncol03036
]
116248788
03400 DNA repair and recombination proteins [BR:
ncol03400
]
116248788
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116248788
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
116248788
Chromosome and associated proteins [BR:
ncol03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
116248788
DNA repair and recombination proteins [BR:
ncol03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
116248788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
DUF3143
Motif
Other DBs
NCBI-GeneID:
116248788
NCBI-ProteinID:
XP_049931924
LinkDB
All DBs
Position
2:33483323..33496350
Genome browser
AA seq
386 aa
AA seq
DB search
MAVRAEISGGGFASLPPLIAAQLNYLLTYSPLPFKVHQIWSGCKYPRYSDRFTLLVPYCL
DYVKWDIIYNAQYPMAAPDVIFPLEAEDFHPLELVSGQQEIEKAKSSLHDWNINDPTKLL
SLVYELRNMYMRYQKKRIGELDDARIKFEISTILSREGLEMSIVSGNGRPDEVKFAVPLL
DIDLNKLVNGCPWKHQQKIHLQVIFPVSQKYVSAPSAPRVKLVSSPELKALLSVEDVKLP
VWLDGMCMAEYLPALEDNLKMQVVEAVTSIGARRRFIEALAPLFGRPLEADPVFCRRATV
LSVSGSFTFLVYFYLACQFPKQQPVLVLQSCQHFDSQGAPVTSPHLTDYPWSPRWDPSQM
VERIFEFMTEECLNFKTYCNDSLQQQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagagcagaaatatccggcggcggtttcgcgtcgcttcctccacttatagct
gcccagctcaattacctccttacctactcccctcttcccttcaaggttcatcaaatatgg
tctggttgtaaatatcctcgctattcagatcggtttactttactggttccatattgctta
gattatgtcaaatgggatataatatacaatgcacagtatccgatggcagcacctgatgtt
atatttcctttagaagcggaagactttcatcctcttgagttagtttctggacagcaagag
attgagaaggcaaagagtagtctacatgactggaacatcaatgatccaacaaaactttta
tctcttgtctatgagctgaggaacatgtacatgcgctaccagaagaagcgcataggagag
ctggatgatgcaagaataaagtttgaaattagtactattctgtctagggagggtcttgag
atgtcaatagtttctggcaatggtaggcctgatgaagtgaagtttgcagtccctttactg
gatatagatttgaacaaacttgtgaatgggtgtccttggaagcatcaacaaaagatacat
ttgcaggtgatatttccagttagtcaaaagtatgtttcagctccttctgctccacgtgtg
aaattggtctcctcaccagagctgaaggcattgttgtccgttgaagatgtcaagcttcca
gtttggctagatggcatgtgtatggctgaatatcttcctgcattagaagataatctaaag
atgcaggttgtggaggccgtgacatcaattggtgcaaggaggcgcttcattgaagctttg
gctcctttatttggtaggccattggaggctgatccggtgttctgcaggagagccacagtt
ctttcggtttctggttcttttacctttctggtctatttttaccttgcatgccagttccct
aagcagcaacctgtgttagtcttgcaaagttgtcagcattttgactcacaaggtgctccg
gtgacctcgcctcatttgactgactatccctggagtcccagatgggatccgtcgcagatg
gttgagcgtatatttgaattcatgacggaagaatgcctcaactttaaaacatactgcaac
gattcacttcaacagcaatag
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