KEGG T07418: 116249552

Nymphaea colorata (blue-petal water lily): 116249552

Entry

116249552         CDS       T07418

Name

(RefSeq) endonuclease III homolog 1, chloroplastic isoform X1

K10773

endonuclease III [EC:3.2.2.- 4.2.99.18]

Organism

ncol Nymphaea colorata (blue-petal water lily)

Pathway

ncol03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:ncol00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116249552
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncol03400]
    116249552
Enzymes [BR:ncol01000]
4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     116249552
DNA repair and recombination proteins [BR:ncol03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     116249552
Prokaryotic type
     116249552

SSDB

Motif

Pfam:

HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH HHH_8

Other DBs

NCBI-GeneID:

116249552

NCBI-ProteinID:

XP_031478536

LinkDB

Position

3:19254960..19275374

AA seq 372 aa
MTMPLSNCLRSTLVPLPRSFLSLGMATRRGRGVRFSSNSKADEDANASQLTRNQISASKK
RVKATVDVETKKMGADSLNERLGSLPEIEDFAFHKTRKSTSRQAAVSSTSPPVTNGTDLS
KSTVEPPAGWQEILQGIRNMRASEDAPVDLVGCEKAGRFLPEKQRRFVVLISALLSSQTK
DAVTDGAIQRLHQNGLLSADAITNADESILRSLIYPVGFYTRKAVYMKKVSEICLSKYGG
DIPSSLEELLSLPGVGPKMAHLVMTVAWDNVQGICVDTHVHRICNRLGWVSKLGSTQKTS
TPEETRVSLEYWLPKEEWAPINPLLVGFGQTVCTPLRPKCGSCLVNHICPSAFKEAATSP
ASKAKKASPRKR

NT seq 1119 nt +upstreamnt +downstreamnt
atgacaatgcctctgtccaattgcctgcggagcaccctcgtgccgctgccacgctcgttt
ctctcactggggatggcgacaaggcggggaagaggcgttcgtttctcttcaaactcgaag
gcagacgaagatgccaatgcaagtcaactaactaggaaccaaatctctgcgagcaagaag
agggtgaaggcgacggtggacgtagagaccaagaagatgggagctgattctttgaatgaa
aggcttggaagcctccctgagattgaagattttgctttccacaagactaggaagtctact
tcaagacaggcagcggtttcatctacatctccccctgtgacgaatgggactgatctctcc
aagtcaacagtggaaccacctgctggttggcaggaaattttgcaagggattcggaacatg
agagcttctgaagatgctcctgtagacttggttggatgtgagaaagctggtagatttctg
ccagaaaagcaaaggagatttgtggttctcatttcagctcttttatcaagtcaaaccaag
gatgctgtcactgatggagccattcaacggcttcatcaaaatggtcttttgagtgctgat
gccatcacaaatgcagatgagtcaatccttagaagcttgatctatccagtaggattttat
acaagaaaggctgtttacatgaaaaaagtttctgaaatttgcctctcaaagtatggagga
gacattcccagttctttagaggagttactctcacttccaggagtcggccctaagatggct
catttggtcatgactgtggcttgggataatgttcaaggcatatgtgtagacacgcatgtt
catcggatttgcaatcggttaggatgggtatcaaagctagggtcaacacagaaaacgtca
acacctgaagaaacaagagtctcattggaatattggcttccaaaggaagagtgggctcca
atcaatccgctactggttgggtttggacagacagtatgcacccctcttcgtccaaaatgt
ggctcatgtcttgtaaatcatatttgcccctctgccttcaaggaagcggctaccagtcca
gcttctaaggccaaaaaggcaagtccgaggaaaagatag

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