Nymphaea colorata (blue-petal water lily): 116253416
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Entry
116253416 CDS
T07418
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34-like
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
ncol
Nymphaea colorata (blue-petal water lily)
Pathway
ncol04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116253416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncol04121
]
116253416
Enzymes [BR:
ncol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116253416
Ubiquitin system [BR:
ncol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116253416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
116253416
NCBI-ProteinID:
XP_031484078
LinkDB
All DBs
Position
4:complement(24764772..24768173)
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AA seq
319 aa
AA seq
DB search
MVFKWVDLVGLCQRSVCRCFRVEKDSMETKAESSYSLDDAKEAENMKPITKDAVVADKGY
GLFGCSHYRRRCKIRAPCCNEVFDCRHCHNEAKNSVDVDPLDRHEIPRHEVKTVICSLCG
TEQDVQQNCVSCGACMGKYFCGICKLLDDDVSKRQYHCDGCGICRTGGQENFFHCDKCGC
CYSTWLKNAHRCVERAMHHSCSICFEYLFDSVKDISVLRCGHTLHMDCLKEMKRHFQFAC
PVCSKSICDMSTLWERLDQEVAATPMPEMYQNKMVWILCNDCGTTSEVHFHVLAHKCPGC
NSYNTRQTRGGSGSCLSRS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggtctttaagtgggtggatttggttggactttgtcagaggtctgtctgtcgctgtttc
agagtggagaaggattcaatggagacgaaggcagagtcctcgtacagtttggatgatgcc
aaagaggcagaaaatatgaagccaatcacgaaagatgcagtggttgctgataaaggatat
ggcctttttgggtgctcacattatagaagaaggtgcaagatcagggcaccttgttgcaat
gaagtctttgattgcaggcattgccataatgaagccaagaactcagtagatgttgatcct
cttgacagacatgaaattccgcgtcatgaagttaaaacggtgatatgttccttgtgtggc
acagagcaagatgttcagcaaaattgcgtaagctgtggtgcctgtatgggaaaatacttc
tgtggaatatgcaagctcttggatgatgatgtttcaaagaggcagtaccactgtgatgga
tgtggcatctgcagaactgggggtcaggaaaatttcttccactgcgacaaatgtggatgc
tgttattccacctggctaaagaatgctcaccgttgtgtggagagggcaatgcaccacagc
tgctctatctgctttgagtacctcttcgattctgtaaaagatatcagtgtcctaagatgc
gggcacacactgcatatggactgcctgaaagagatgaagcgtcactttcagtttgcctgc
ccagtttgctcaaaatcgatttgtgacatgtctacactgtgggaaaggctggaccaggag
gtcgcagcaacacctatgcctgaaatgtaccaaaacaagatggtgtggattctctgcaat
gactgtggtaccacatctgaggtccattttcatgtactcgcacacaaatgccctggttgc
aactcttacaacacacggcagaccaggggtggatcaggttcgtgcttatccagaagttga
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