Novosphingobium capsulatum: U0041_01500
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Entry
U0041_01500 CDS
T10206
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ncp Novosphingobium capsulatum
Pathway
ncp01501
beta-Lactam resistance
ncp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0041_01500
01503 Cationic antimicrobial peptide (CAMP) resistance
U0041_01500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncp02000
]
U0041_01500
01504 Antimicrobial resistance genes [BR:
ncp01504
]
U0041_01500
Transporters [BR:
ncp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U0041_01500
Antimicrobial resistance genes [BR:
ncp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0041_01500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WQD93299
LinkDB
All DBs
Position
complement(345966..349181)
Genome browser
AA seq
1071 aa
AA seq
DB search
MNFRNLSAWSIRNPVVPIVLFLGLTLAGLVSFMLMKVQDQPDIEFPLVIVQISQPGAAPT
EIETQITQRVESAVRTIAGVDTITSTASEGSSQTMVQFKIGTDIYGAVAEVKNAVDQVRG
DLPDGILEPQVFKAETSSDPIAYWAVSADDMTIEQLSWFVDDTVAKRLLAVPGMAEVHRA
GGVTREIAVTLDPMRMKSFGVTAMQVNNALRQVNLNAAGGKAEVAGARQSVRVLGNARSA
FDLGQTQISVAAGRVIRLSDVADVRDSFSEITSIAKFNGKPVVTFSIARARGESDVSVYD
DTVKELAKISAEQGHKIRFTQLFTSVNYTKQQYHTSMSSMVEGAVLAVIVVFFFLRDWRA
TFVSAIAIPLSAIPTFAVMHLMGFTLNTMSLLALGLVAGVLVDDAIVEIENIVRHIRMGK
TPFQAAIDAADEIGLAVVATTFSIVAVFLPVGLMPGISGQFFKNFGLTVVVAVLFSLLVA
RMITPMVAAYFLKRDQRDIPHGEGPWMDRYMAVLRWSLDTTRAAAYRALHPRRRVRARLR
DHRLWMMGIGLGALVLTGAMFVVIPTQFFPDTDSDFSQINVEMVPGTTIDQTAAKVDEVY
NLIRNEPEIEVALERITEGSGRIIMTLRKDRPRTSLQFQRELTPRLQQIADARVTFQSQN
GGGGGGSGRPISVMLSGSDPDLLQRTAQTLVQQMSGLKQLVAPRISADLRRPEIVITPHL
DLAASLGVTTQALSQTIRIATQGEIDMNSAKFSLSDRQVPIRVKLPLDSRRDLSTIENLP
VQTAMGTSVPLARVASIGFGSGPTTIQRYNQNHRIFVGADLPPGVVKGTAMDAIAKLPIM
QNLPTGVSNAPAGEDRWQQEMLTNFFIALATGVLLVFSVLVLLYHRFVSPLVNMGSLFLA
PLGGLMLLGLVGQALSLPVFIGVLMLFGIVAKNSILLIDFAIEEMSTGKGKLEAITEAGH
KRAQPIIMTTVAMIAGMVPTAISVGGDAGWRAPMGTVVIGGLTLSTLLTLLIVPAGFSLA
DGFEKRLGPWLARVFLASQPRAAGHGAKGAPGGPGGHADGNHTVHEAFPAE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcgcaatctctcggcctggtccatccgcaacccggtcgttcccatcgtcctg
ttcctggggctgaccctggcgggcttggtctccttcatgctgatgaaggtgcaggaccag
cccgatatcgagtttccgctggtgatcgtgcagatcagccagcccggcgccgcgcccact
gaaatcgagacccagatcacgcagcgggtggaaagcgccgtgcgcaccatcgccggggtc
gacacgatcacctccaccgcgtcggaaggctccagccagacgatggtgcagttcaagatc
ggcaccgacatctatggcgcggtggccgaagtgaagaacgcggtggaccaggtgcgtggc
gatctgcccgacggcatcctggaaccgcaggtgttcaaggccgaaacctcgtccgatccg
atcgcctattgggcggtgtcggccgatgacatgacgatcgagcaactgtcgtggttcgtc
gacgataccgtggccaagcgcctgctggcggtgcccggcatggccgaggtgcatcgcgcc
ggcggcgttacccgcgaaatcgccgtgacgctcgatcccatgcgcatgaagtcgttcggc
gtgaccgcgatgcaggtcaacaatgccctgcgccaggtcaacctcaacgcggcgggcggc
aaggccgaagtggccggcgcgcgccagtcggtgcgcgtgctcggcaacgcgcggtccgcc
ttcgatctggggcagacgcagatttccgtggcagccggccgggtgatccgcctgtccgat
gtcgccgacgtgcgcgacagcttcagcgaaatcacctcgatcgccaagttcaacggcaag
ccggtcgtcacgttcagcatcgcccgcgcccgcggcgaatccgatgtcagcgtctatgac
gatacggtcaaggaactggccaagatctcggccgagcaaggccacaagatccgcttcacc
cagctgttcaccagcgtgaactacaccaagcagcagtaccacacctcgatgtcctcgatg
gtcgaaggcgcggtgctggcggtgatcgtggtgttcttcttcctgcgcgattggcgggcc
acgttcgtgtcggccatcgccattccgctctcggccattcccacgttcgctgtgatgcat
ctcatgggctttacgctcaacaccatgtcgctgcttgcgctgggcctggtggcgggcgtg
ctggtggacgatgcgatcgtggaaatcgagaacatcgtgcggcatatccgcatgggcaag
acgccgttccaggccgcgatcgacgcggccgacgaaatcggcctggcggtggtggccacc
accttctcgatcgtggcggtgttcctgccggtgggcctgatgccgggcatctcgggccag
ttcttcaagaactttggcctgaccgtagtagtggcagtgctgttctcgctgctggtggcg
cgcatgatcacgccgatggtcgcggcctatttcctcaagcgtgaccagcgcgacattccc
catggcgaaggcccgtggatggaccgttacatggcggtgctgcgctggtcgctcgatact
acgcgtgcggctgcctatcgcgcgctgcatccgcgccgccgggtgcgggcgcggctgcgc
gatcatcgcctgtggatgatgggcatcggccttggcgcgctggtgctgacgggcgctatg
ttcgtggtcatccccacgcagttcttccccgataccgatagtgatttctcgcagatcaac
gtggaaatggtgcccggcaccacgatcgaccagacggccgccaaggtggatgaggtgtac
aacctgatccgcaacgagcccgagatcgaagtggcgctggagcggatcaccgagggcagc
gggcgcatcatcatgacgctgcgcaaggaccgcccgcgcaccagcctgcagttccagcgc
gaactgaccccgcgcctgcagcagatcgccgatgcgcgcgtcacgttccaaagccagaat
ggcggcggcggtggcggctcgggccggccgatcagcgtgatgctctcgggctctgatccc
gatctcctgcagcgcaccgcgcaaaccctggtgcagcagatgagcgggctcaagcaactg
gtggcgccgcgcatcagcgccgacttgcgccgcccggaaatcgtcatcaccccgcatctt
gatctggccgcctcgctcggcgtgacgacccaggcgctcagccagacgatccgcatcgcc
acccagggcgaaatcgacatgaacagcgccaagttctcgctgtccgatcgccaggtaccg
atccgggtcaagctgccgctcgattcccgccgcgatctgtcgaccatcgaaaacctgccg
gtgcagactgcgatgggcacgtcggtgccgctggcgcgcgttgccagcatcggctttggc
tcgggccccaccacgatccagcgctacaaccagaaccaccgcatcttcgtgggcgccgat
ctgccgcccggcgtggtcaagggcacggcgatggatgccattgccaagctgccgatcatg
cagaacctgcccaccggcgtatccaacgccccggccggggaagaccgctggcagcaggaa
atgctcaccaacttcttcatcgcgctcgccaccggcgtgctgctggtgttctcggtgctg
gtgctgctctatcaccgcttcgtctcgccgctggtcaacatgggctcgctgttcctggcg
ccgctgggtgggctgatgctgctgggcctggttggccaggcactgagcctgccggtgttc
atcggcgtgctcatgctgttcggcatcgtcgccaagaactcgatcctgctgatcgacttc
gcgatcgaggaaatgtcgaccggcaaaggcaagctggaggcgattaccgaggccgggcac
aagcgcgcgcagccgatcatcatgaccaccgtggcgatgatcgccggcatggtgcccact
gccatttcggtgggcggtgacgcgggctggcgcgcgccgatgggcacggtggtgatcggc
ggcctcacgctctccaccctgctcacgctgctgatcgtgccggccggtttcagcctggct
gacggctttgaaaagcggcttggtccctggctggcccgcgtgttcctggccagccagccg
cgtgccgccgggcatggcgccaagggcgcgcctggcggccccggcggccatgccgatggg
aaccacaccgtgcatgaggcattcccggcggagtga
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