Novosphingobium capsulatum: U0041_07865
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Entry
U0041_07865 CDS
T10206
Name
(GenBank) class III extradiol dioxygenase family protein
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
ncp Novosphingobium capsulatum
Pathway
ncp00362
Benzoate degradation
ncp00627
Aminobenzoate degradation
ncp01100
Metabolic pathways
ncp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ncp00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
U0041_07865
00627 Aminobenzoate degradation
U0041_07865
00624 Polycyclic aromatic hydrocarbon degradation
U0041_07865
Enzymes [BR:
ncp01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
U0041_07865
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GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
WQD94485
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Position
1705134..1705979
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AA seq
281 aa
AA seq
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MSAQIIGGYFSSHVPGIGGAIARGAQAEPYWKPFFDGYPPVRTWLAQARPDVAIVFYNDH
GLNFFLDAMPTFAVGAAAAYPNEDEGWGLPVYKTFQGDPGLSWHIIEELVGSGFDITMCQ
KMKVDHALSIPFELAYPDVAAWPVKIVPIAINTVQYPLPSPQRCYDLGRAVHRAFQSWQD
DTRVVVIGSGGLSHQLDGARAGFINADYDRFCLDHLANDPEALLRHSTEEVAAIAGTQGV
EIVNWIAARGALGQGPHAEVTRNYHIPISNTAAATLVLTPT
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcagatcatcggtggctatttcagcagccacgttcccggcatcggcggcgcg
attgcgcgcggcgcccaggcagagccctattggaagccgttcttcgatggctatccaccg
gtgcgcacgtggctggcgcaggcgcgcccggacgtggccattgtgttctacaacgatcat
gggctcaacttcttcctcgatgccatgcccacgttcgcggtgggcgcagcggcggcctat
cccaacgaggatgaaggctggggcctgccggtttacaagactttccaaggcgatcccggg
ctttcctggcacattatcgaggaactggtcggcagcgggttcgacatcacgatgtgccag
aagatgaaggtcgaccacgccctgtcgatcccgttcgagctcgcctatcccgacgtggcg
gcctggccggtgaagatcgtgccgattgcgatcaacaccgtgcaatacccgctaccttcg
ccgcagcgctgctatgatctgggccgtgccgtgcaccgcgcgttccaatcctggcaggat
gacacacgcgtggtggtgatcggatcgggcggcttgtcgcatcagctggatggcgcgcgc
gccgggttcatcaatgccgactatgaccgcttctgcctcgatcacctggccaacgatccc
gaggcgctgttgcgccattcgacggaagaggttgccgcgatcgccggcacgcaaggggtg
gagatcgtcaactggatcgccgcgcgtggcgcgctgggccaggggccgcatgccgaagtg
acgcggaattatcacatcccgatcagcaatacggccgcagcaacgctggtgttgaccccg
acctga
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